Protein–RNA interactions for Protein: Q8IZH2

XRN1, 5'-3' exoribonuclease 1, humanhuman

Known RBP Predictions only

Length 1,706 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1Q8IZH2 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC26.59■■□□□ 1.85
XRN1Q8IZH2 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC26.59■■□□□ 1.85
XRN1Q8IZH2 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC26.59■■□□□ 1.85
XRN1Q8IZH2 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
XRN1Q8IZH2 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC26.59■■□□□ 1.85
XRN1Q8IZH2 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC26.59■■□□□ 1.85
XRN1Q8IZH2 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
XRN1Q8IZH2 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
XRN1Q8IZH2 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC26.59■■□□□ 1.85
XRN1Q8IZH2 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
XRN1Q8IZH2 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
XRN1Q8IZH2 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
XRN1Q8IZH2 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
XRN1Q8IZH2 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
XRN1Q8IZH2 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC26.59■■□□□ 1.85
XRN1Q8IZH2 IL11-204ENST00000590625 1028 ntTSL 2 BASIC26.59■■□□□ 1.85
XRN1Q8IZH2 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC26.58■■□□□ 1.85
XRN1Q8IZH2 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC26.58■■□□□ 1.85
XRN1Q8IZH2 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
XRN1Q8IZH2 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC26.58■■□□□ 1.85
XRN1Q8IZH2 GXYLT1P4-201ENST00000613576 1192 ntBASIC26.58■■□□□ 1.85
XRN1Q8IZH2 LITAF-220ENST00000620789 692 ntTSL 5 BASIC26.58■■□□□ 1.85
XRN1Q8IZH2 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC26.58■■□□□ 1.85
XRN1Q8IZH2 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC26.58■■□□□ 1.85
XRN1Q8IZH2 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC26.58■■□□□ 1.85
XRN1Q8IZH2 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC26.58■■□□□ 1.85
XRN1Q8IZH2 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
XRN1Q8IZH2 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC26.57■■□□□ 1.84
XRN1Q8IZH2 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC26.57■■□□□ 1.84
XRN1Q8IZH2 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
XRN1Q8IZH2 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC26.57■■□□□ 1.84
XRN1Q8IZH2 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
XRN1Q8IZH2 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC26.57■■□□□ 1.84
XRN1Q8IZH2 AP000867.3-201ENST00000524675 377 ntBASIC26.57■■□□□ 1.84
XRN1Q8IZH2 TEN1-204ENST00000588202 862 ntTSL 3 BASIC26.57■■□□□ 1.84
XRN1Q8IZH2 AC138894.3-201ENST00000603787 634 ntBASIC26.57■■□□□ 1.84
XRN1Q8IZH2 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC26.57■■□□□ 1.84
XRN1Q8IZH2 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC26.57■■□□□ 1.84
XRN1Q8IZH2 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
XRN1Q8IZH2 BAALC-202ENST00000306391 243 ntTSL 5 BASIC26.56■■□□□ 1.84
XRN1Q8IZH2 BAALC-204ENST00000330955 222 ntTSL 5 BASIC26.56■■□□□ 1.84
XRN1Q8IZH2 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC26.56■■□□□ 1.84
XRN1Q8IZH2 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC26.56■■□□□ 1.84
XRN1Q8IZH2 KRT16P4-201ENST00000453883 522 ntBASIC26.56■■□□□ 1.84
XRN1Q8IZH2 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC26.56■■□□□ 1.84
XRN1Q8IZH2 FOSL1P1-201ENST00000511041 816 ntBASIC26.56■■□□□ 1.84
XRN1Q8IZH2 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC26.56■■□□□ 1.84
XRN1Q8IZH2 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC26.56■■□□□ 1.84
XRN1Q8IZH2 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC26.56■■□□□ 1.84
XRN1Q8IZH2 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC26.56■■□□□ 1.84
XRN1Q8IZH2 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
XRN1Q8IZH2 NAA38-203ENST00000575071 553 ntTSL 2 BASIC26.56■■□□□ 1.84
XRN1Q8IZH2 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC26.56■■□□□ 1.84
XRN1Q8IZH2 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC26.56■■□□□ 1.84
XRN1Q8IZH2 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
XRN1Q8IZH2 TP73-AS1-207ENST00000624167 988 ntBASIC26.56■■□□□ 1.84
XRN1Q8IZH2 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC26.56■■□□□ 1.84
XRN1Q8IZH2 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC26.56■■□□□ 1.84
XRN1Q8IZH2 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
XRN1Q8IZH2 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC26.55■■□□□ 1.84
XRN1Q8IZH2 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC26.55■■□□□ 1.84
XRN1Q8IZH2 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC26.55■■□□□ 1.84
XRN1Q8IZH2 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
XRN1Q8IZH2 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC26.55■■□□□ 1.84
XRN1Q8IZH2 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
XRN1Q8IZH2 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
XRN1Q8IZH2 AC074051.2-201ENST00000565115 352 ntBASIC26.55■■□□□ 1.84
XRN1Q8IZH2 AL390719.2-201ENST00000606993 987 ntBASIC26.55■■□□□ 1.84
XRN1Q8IZH2 AC073314.1-201ENST00000568729 2216 ntBASIC26.55■■□□□ 1.84
XRN1Q8IZH2 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC26.55■■□□□ 1.84
XRN1Q8IZH2 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC26.55■■□□□ 1.84
XRN1Q8IZH2 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC26.55■■□□□ 1.84
XRN1Q8IZH2 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC26.55■■□□□ 1.84
XRN1Q8IZH2 AL512408.1-201ENST00000569378 2000 ntBASIC26.55■■□□□ 1.84
XRN1Q8IZH2 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC26.54■■□□□ 1.84
XRN1Q8IZH2 HLA-A-201ENST00000376802 1334 ntBASIC26.54■■□□□ 1.84
XRN1Q8IZH2 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
XRN1Q8IZH2 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC26.54■■□□□ 1.84
XRN1Q8IZH2 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
XRN1Q8IZH2 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC26.54■■□□□ 1.84
XRN1Q8IZH2 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC26.54■■□□□ 1.84
XRN1Q8IZH2 RNA5SP419-201ENST00000515908 135 ntBASIC26.54■■□□□ 1.84
XRN1Q8IZH2 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC26.54■■□□□ 1.84
XRN1Q8IZH2 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
XRN1Q8IZH2 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
XRN1Q8IZH2 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
XRN1Q8IZH2 LINC00167-201ENST00000530583 1419 ntBASIC26.54■■□□□ 1.84
XRN1Q8IZH2 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
XRN1Q8IZH2 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC26.54■■□□□ 1.84
XRN1Q8IZH2 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
XRN1Q8IZH2 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC26.54■■□□□ 1.84
XRN1Q8IZH2 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC26.53■■□□□ 1.84
XRN1Q8IZH2 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC26.53■■□□□ 1.84
XRN1Q8IZH2 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC26.53■■□□□ 1.84
XRN1Q8IZH2 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC26.53■■□□□ 1.84
XRN1Q8IZH2 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC26.53■■□□□ 1.84
XRN1Q8IZH2 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC26.53■■□□□ 1.84
XRN1Q8IZH2 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC26.53■■□□□ 1.84
XRN1Q8IZH2 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
XRN1Q8IZH2 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms