Protein–RNA interactions for Protein: Q8IXQ3

C9orf40, Uncharacterized protein C9orf40, humanhuman

Predictions only

Length 194 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40Q8IXQ3 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC17.66■□□□□ 0.42
C9orf40Q8IXQ3 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
C9orf40Q8IXQ3 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
C9orf40Q8IXQ3 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
C9orf40Q8IXQ3 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC17.66■□□□□ 0.42
C9orf40Q8IXQ3 IRX1P1-201ENST00000438849 1838 ntBASIC17.65■□□□□ 0.42
C9orf40Q8IXQ3 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
C9orf40Q8IXQ3 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC17.65■□□□□ 0.42
C9orf40Q8IXQ3 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC17.65■□□□□ 0.42
C9orf40Q8IXQ3 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC17.65■□□□□ 0.42
C9orf40Q8IXQ3 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
C9orf40Q8IXQ3 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
C9orf40Q8IXQ3 AC211429.1-201ENST00000415277 523 ntBASIC17.65■□□□□ 0.42
C9orf40Q8IXQ3 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
C9orf40Q8IXQ3 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
C9orf40Q8IXQ3 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC17.65■□□□□ 0.42
C9orf40Q8IXQ3 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC17.65■□□□□ 0.42
C9orf40Q8IXQ3 C2orf69P3-201ENST00000565542 1120 ntBASIC17.65■□□□□ 0.42
C9orf40Q8IXQ3 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC17.65■□□□□ 0.42
C9orf40Q8IXQ3 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
C9orf40Q8IXQ3 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC17.65■□□□□ 0.42
C9orf40Q8IXQ3 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
C9orf40Q8IXQ3 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
C9orf40Q8IXQ3 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
C9orf40Q8IXQ3 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
C9orf40Q8IXQ3 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
C9orf40Q8IXQ3 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
C9orf40Q8IXQ3 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
C9orf40Q8IXQ3 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
C9orf40Q8IXQ3 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.42
C9orf40Q8IXQ3 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
C9orf40Q8IXQ3 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
C9orf40Q8IXQ3 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC17.64■□□□□ 0.42
C9orf40Q8IXQ3 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
C9orf40Q8IXQ3 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
C9orf40Q8IXQ3 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
C9orf40Q8IXQ3 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
C9orf40Q8IXQ3 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC17.64■□□□□ 0.41
C9orf40Q8IXQ3 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
C9orf40Q8IXQ3 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
C9orf40Q8IXQ3 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC17.64■□□□□ 0.41
C9orf40Q8IXQ3 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
C9orf40Q8IXQ3 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC17.64■□□□□ 0.41
C9orf40Q8IXQ3 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
C9orf40Q8IXQ3 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC17.64■□□□□ 0.41
C9orf40Q8IXQ3 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
C9orf40Q8IXQ3 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC17.64■□□□□ 0.41
C9orf40Q8IXQ3 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
C9orf40Q8IXQ3 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
C9orf40Q8IXQ3 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
C9orf40Q8IXQ3 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
C9orf40Q8IXQ3 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
C9orf40Q8IXQ3 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC17.64■□□□□ 0.41
C9orf40Q8IXQ3 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
C9orf40Q8IXQ3 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
C9orf40Q8IXQ3 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
C9orf40Q8IXQ3 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
C9orf40Q8IXQ3 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
C9orf40Q8IXQ3 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
C9orf40Q8IXQ3 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
C9orf40Q8IXQ3 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
C9orf40Q8IXQ3 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC17.63■□□□□ 0.41
C9orf40Q8IXQ3 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
C9orf40Q8IXQ3 TSPY14P-201ENST00000303979 915 ntBASIC17.63■□□□□ 0.41
C9orf40Q8IXQ3 HIST1H2APS4-201ENST00000362070 348 ntBASIC17.63■□□□□ 0.41
C9orf40Q8IXQ3 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC17.63■□□□□ 0.41
C9orf40Q8IXQ3 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC17.63■□□□□ 0.41
C9orf40Q8IXQ3 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
C9orf40Q8IXQ3 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC17.63■□□□□ 0.41
C9orf40Q8IXQ3 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
C9orf40Q8IXQ3 AC012306.2-201ENST00000609350 630 ntBASIC17.63■□□□□ 0.41
C9orf40Q8IXQ3 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
C9orf40Q8IXQ3 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC17.63■□□□□ 0.41
C9orf40Q8IXQ3 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC17.63■□□□□ 0.41
C9orf40Q8IXQ3 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC17.63■□□□□ 0.41
C9orf40Q8IXQ3 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
C9orf40Q8IXQ3 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
C9orf40Q8IXQ3 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
C9orf40Q8IXQ3 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
C9orf40Q8IXQ3 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC17.63■□□□□ 0.41
C9orf40Q8IXQ3 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
C9orf40Q8IXQ3 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC17.63■□□□□ 0.41
C9orf40Q8IXQ3 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
C9orf40Q8IXQ3 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC17.63■□□□□ 0.41
C9orf40Q8IXQ3 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
C9orf40Q8IXQ3 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
C9orf40Q8IXQ3 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
C9orf40Q8IXQ3 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC17.62■□□□□ 0.41
C9orf40Q8IXQ3 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
C9orf40Q8IXQ3 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC17.62■□□□□ 0.41
C9orf40Q8IXQ3 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
C9orf40Q8IXQ3 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
C9orf40Q8IXQ3 CRAT-202ENST00000393384 973 ntTSL 2 BASIC17.62■□□□□ 0.41
C9orf40Q8IXQ3 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
C9orf40Q8IXQ3 AC145285.6-201ENST00000604632 637 ntBASIC17.62■□□□□ 0.41
C9orf40Q8IXQ3 AC097493.4-201ENST00000641197 219 ntBASIC17.62■□□□□ 0.41
C9orf40Q8IXQ3 UBQLN4P1-201ENST00000461599 1801 ntBASIC17.62■□□□□ 0.41
C9orf40Q8IXQ3 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
C9orf40Q8IXQ3 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
C9orf40Q8IXQ3 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms