Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TRIM48Q8IWZ4 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
TRIM48Q8IWZ4 AC008040.2-201ENST00000461049 708 ntBASIC18.75■□□□□ 0.59
TRIM48Q8IWZ4 FDX2-206ENST00000492239 773 ntTSL 2 BASIC18.75■□□□□ 0.59
TRIM48Q8IWZ4 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC18.75■□□□□ 0.59
TRIM48Q8IWZ4 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC18.75■□□□□ 0.59
TRIM48Q8IWZ4 AC145285.6-201ENST00000604632 637 ntBASIC18.75■□□□□ 0.59
TRIM48Q8IWZ4 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC18.75■□□□□ 0.59
TRIM48Q8IWZ4 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC18.75■□□□□ 0.59
TRIM48Q8IWZ4 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC18.75■□□□□ 0.59
TRIM48Q8IWZ4 CYP2D8P-201ENST00000433633 1490 ntBASIC18.75■□□□□ 0.59
TRIM48Q8IWZ4 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TRIM48Q8IWZ4 BCL2-203ENST00000589955 5011 ntBASIC18.75■□□□□ 0.59
TRIM48Q8IWZ4 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC18.75■□□□□ 0.59
TRIM48Q8IWZ4 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
TRIM48Q8IWZ4 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
TRIM48Q8IWZ4 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
TRIM48Q8IWZ4 KRT18P22-201ENST00000402024 1347 ntBASIC18.74■□□□□ 0.59
TRIM48Q8IWZ4 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TRIM48Q8IWZ4 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC18.74■□□□□ 0.59
TRIM48Q8IWZ4 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
TRIM48Q8IWZ4 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
TRIM48Q8IWZ4 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC18.74■□□□□ 0.59
TRIM48Q8IWZ4 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TRIM48Q8IWZ4 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TRIM48Q8IWZ4 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
TRIM48Q8IWZ4 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
TRIM48Q8IWZ4 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC18.74■□□□□ 0.59
TRIM48Q8IWZ4 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC18.74■□□□□ 0.59
TRIM48Q8IWZ4 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
TRIM48Q8IWZ4 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC18.74■□□□□ 0.59
TRIM48Q8IWZ4 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC18.74■□□□□ 0.59
TRIM48Q8IWZ4 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC18.74■□□□□ 0.59
TRIM48Q8IWZ4 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC18.74■□□□□ 0.59
TRIM48Q8IWZ4 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC18.74■□□□□ 0.59
TRIM48Q8IWZ4 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC18.74■□□□□ 0.59
TRIM48Q8IWZ4 GLRB-205ENST00000512619 728 ntTSL 3 BASIC18.74■□□□□ 0.59
TRIM48Q8IWZ4 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC18.74■□□□□ 0.59
TRIM48Q8IWZ4 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC18.74■□□□□ 0.59
TRIM48Q8IWZ4 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC18.74■□□□□ 0.59
TRIM48Q8IWZ4 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TRIM48Q8IWZ4 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
TRIM48Q8IWZ4 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
TRIM48Q8IWZ4 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TRIM48Q8IWZ4 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
TRIM48Q8IWZ4 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
TRIM48Q8IWZ4 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC18.74■□□□□ 0.59
TRIM48Q8IWZ4 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
TRIM48Q8IWZ4 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC18.73■□□□□ 0.59
TRIM48Q8IWZ4 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC18.73■□□□□ 0.59
TRIM48Q8IWZ4 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC18.73■□□□□ 0.59
TRIM48Q8IWZ4 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TRIM48Q8IWZ4 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC18.73■□□□□ 0.59
TRIM48Q8IWZ4 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
TRIM48Q8IWZ4 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
TRIM48Q8IWZ4 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
TRIM48Q8IWZ4 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC18.73■□□□□ 0.59
TRIM48Q8IWZ4 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TRIM48Q8IWZ4 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
TRIM48Q8IWZ4 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
TRIM48Q8IWZ4 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TRIM48Q8IWZ4 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TRIM48Q8IWZ4 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC18.73■□□□□ 0.59
TRIM48Q8IWZ4 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TRIM48Q8IWZ4 KRT18P21-201ENST00000515767 1272 ntBASIC18.73■□□□□ 0.59
TRIM48Q8IWZ4 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
TRIM48Q8IWZ4 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC18.73■□□□□ 0.59
TRIM48Q8IWZ4 AC012306.2-201ENST00000609350 630 ntBASIC18.73■□□□□ 0.59
TRIM48Q8IWZ4 AC010947.1-201ENST00000623454 693 ntBASIC18.73■□□□□ 0.59
TRIM48Q8IWZ4 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
TRIM48Q8IWZ4 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC18.73■□□□□ 0.59
TRIM48Q8IWZ4 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
TRIM48Q8IWZ4 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
TRIM48Q8IWZ4 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC18.73■□□□□ 0.59
TRIM48Q8IWZ4 ZNF815P-204ENST00000434898 1737 ntBASIC18.73■□□□□ 0.59
TRIM48Q8IWZ4 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC18.73■□□□□ 0.59
TRIM48Q8IWZ4 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC18.73■□□□□ 0.59
TRIM48Q8IWZ4 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
TRIM48Q8IWZ4 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC18.73■□□□□ 0.59
TRIM48Q8IWZ4 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
TRIM48Q8IWZ4 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC18.73■□□□□ 0.59
TRIM48Q8IWZ4 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TRIM48Q8IWZ4 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TRIM48Q8IWZ4 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
TRIM48Q8IWZ4 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC18.72■□□□□ 0.59
TRIM48Q8IWZ4 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC18.72■□□□□ 0.59
TRIM48Q8IWZ4 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
TRIM48Q8IWZ4 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC18.72■□□□□ 0.59
TRIM48Q8IWZ4 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
TRIM48Q8IWZ4 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC18.72■□□□□ 0.59
TRIM48Q8IWZ4 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
TRIM48Q8IWZ4 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
TRIM48Q8IWZ4 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
TRIM48Q8IWZ4 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TRIM48Q8IWZ4 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC18.72■□□□□ 0.59
TRIM48Q8IWZ4 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
TRIM48Q8IWZ4 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC18.72■□□□□ 0.59
TRIM48Q8IWZ4 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
TRIM48Q8IWZ4 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC18.72■□□□□ 0.59
TRIM48Q8IWZ4 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC18.72■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms