Protein–RNA interactions for Protein: Q8IWN7

RP1L1, Retinitis pigmentosa 1-like 1 protein, humanhuman

Predicted RBP Predictions only

Length 2,480 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RP1L1Q8IWN7 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
RP1L1Q8IWN7 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
RP1L1Q8IWN7 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC17.29■□□□□ 0.36
RP1L1Q8IWN7 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RP1L1Q8IWN7 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
RP1L1Q8IWN7 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
RP1L1Q8IWN7 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
RP1L1Q8IWN7 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
RP1L1Q8IWN7 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
RP1L1Q8IWN7 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
RP1L1Q8IWN7 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
RP1L1Q8IWN7 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RP1L1Q8IWN7 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RP1L1Q8IWN7 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC17.29■□□□□ 0.36
RP1L1Q8IWN7 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
RP1L1Q8IWN7 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
RP1L1Q8IWN7 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC17.29■□□□□ 0.36
RP1L1Q8IWN7 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC17.29■□□□□ 0.36
RP1L1Q8IWN7 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
RP1L1Q8IWN7 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC17.29■□□□□ 0.36
RP1L1Q8IWN7 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
RP1L1Q8IWN7 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
RP1L1Q8IWN7 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
RP1L1Q8IWN7 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
RP1L1Q8IWN7 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
RP1L1Q8IWN7 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
RP1L1Q8IWN7 ATP5G2P1-201ENST00000433580 426 ntBASIC17.28■□□□□ 0.36
RP1L1Q8IWN7 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC17.28■□□□□ 0.36
RP1L1Q8IWN7 AC139530.3-201ENST00000620344 690 ntBASIC17.28■□□□□ 0.36
RP1L1Q8IWN7 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RP1L1Q8IWN7 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RP1L1Q8IWN7 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RP1L1Q8IWN7 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RP1L1Q8IWN7 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
RP1L1Q8IWN7 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
RP1L1Q8IWN7 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC17.28■□□□□ 0.36
RP1L1Q8IWN7 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC17.28■□□□□ 0.36
RP1L1Q8IWN7 AL845331.1-201ENST00000424978 1190 ntBASIC17.28■□□□□ 0.36
RP1L1Q8IWN7 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC17.28■□□□□ 0.36
RP1L1Q8IWN7 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC17.28■□□□□ 0.36
RP1L1Q8IWN7 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC17.28■□□□□ 0.36
RP1L1Q8IWN7 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RP1L1Q8IWN7 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
RP1L1Q8IWN7 DET1-207ENST00000564406 2315 ntTSL 2 BASIC17.28■□□□□ 0.36
RP1L1Q8IWN7 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
RP1L1Q8IWN7 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC17.27■□□□□ 0.36
RP1L1Q8IWN7 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
RP1L1Q8IWN7 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC17.27■□□□□ 0.36
RP1L1Q8IWN7 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC17.27■□□□□ 0.36
RP1L1Q8IWN7 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
RP1L1Q8IWN7 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
RP1L1Q8IWN7 Telomerase-vert.1-201ENST00000363312 438 ntBASIC17.27■□□□□ 0.36
RP1L1Q8IWN7 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
RP1L1Q8IWN7 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
RP1L1Q8IWN7 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC17.27■□□□□ 0.36
RP1L1Q8IWN7 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
RP1L1Q8IWN7 AC012313.10-201ENST00000623509 926 ntBASIC17.27■□□□□ 0.36
RP1L1Q8IWN7 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
RP1L1Q8IWN7 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
RP1L1Q8IWN7 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
RP1L1Q8IWN7 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC17.27■□□□□ 0.36
RP1L1Q8IWN7 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
RP1L1Q8IWN7 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
RP1L1Q8IWN7 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
RP1L1Q8IWN7 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC17.27■□□□□ 0.35
RP1L1Q8IWN7 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC17.27■□□□□ 0.35
RP1L1Q8IWN7 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
RP1L1Q8IWN7 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC17.27■□□□□ 0.35
RP1L1Q8IWN7 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.35
RP1L1Q8IWN7 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC17.27■□□□□ 0.35
RP1L1Q8IWN7 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC17.27■□□□□ 0.35
RP1L1Q8IWN7 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
RP1L1Q8IWN7 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
RP1L1Q8IWN7 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
RP1L1Q8IWN7 KRT8P8-201ENST00000434750 1448 ntBASIC17.27■□□□□ 0.35
RP1L1Q8IWN7 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC17.26■□□□□ 0.35
RP1L1Q8IWN7 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RP1L1Q8IWN7 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
RP1L1Q8IWN7 AP000347.1-202ENST00000435868 847 ntBASIC17.26■□□□□ 0.35
RP1L1Q8IWN7 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC17.26■□□□□ 0.35
RP1L1Q8IWN7 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
RP1L1Q8IWN7 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC17.26■□□□□ 0.35
RP1L1Q8IWN7 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC17.26■□□□□ 0.35
RP1L1Q8IWN7 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
RP1L1Q8IWN7 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RP1L1Q8IWN7 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RP1L1Q8IWN7 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RP1L1Q8IWN7 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
RP1L1Q8IWN7 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC17.26■□□□□ 0.35
RP1L1Q8IWN7 LY6E-213ENST00000522528 606 ntTSL 3 BASIC17.26■□□□□ 0.35
RP1L1Q8IWN7 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC17.26■□□□□ 0.35
RP1L1Q8IWN7 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC17.26■□□□□ 0.35
RP1L1Q8IWN7 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RP1L1Q8IWN7 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RP1L1Q8IWN7 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC17.25■□□□□ 0.35
RP1L1Q8IWN7 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
RP1L1Q8IWN7 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC17.25■□□□□ 0.35
RP1L1Q8IWN7 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
RP1L1Q8IWN7 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
RP1L1Q8IWN7 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC17.25■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms