Protein–RNA interactions for Protein: Q86VH4

LRRTM4, Leucine-rich repeat transmembrane neuronal protein 4, humanhuman

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM4Q86VH4 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
LRRTM4Q86VH4 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
LRRTM4Q86VH4 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
LRRTM4Q86VH4 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC18.76■□□□□ 0.59
LRRTM4Q86VH4 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC18.76■□□□□ 0.59
LRRTM4Q86VH4 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC18.76■□□□□ 0.59
LRRTM4Q86VH4 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
LRRTM4Q86VH4 SLC25A1P2-201ENST00000430693 912 ntBASIC18.76■□□□□ 0.59
LRRTM4Q86VH4 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
LRRTM4Q86VH4 CCR12P-201ENST00000446203 998 ntBASIC18.76■□□□□ 0.59
LRRTM4Q86VH4 CA15P1-201ENST00000481698 905 ntBASIC18.76■□□□□ 0.59
LRRTM4Q86VH4 AC128688.1-201ENST00000487626 519 ntBASIC18.76■□□□□ 0.59
LRRTM4Q86VH4 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC18.76■□□□□ 0.59
LRRTM4Q86VH4 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
LRRTM4Q86VH4 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC18.76■□□□□ 0.59
LRRTM4Q86VH4 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC18.76■□□□□ 0.59
LRRTM4Q86VH4 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC18.76■□□□□ 0.59
LRRTM4Q86VH4 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
LRRTM4Q86VH4 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC18.76■□□□□ 0.59
LRRTM4Q86VH4 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
LRRTM4Q86VH4 AC093484.2-201ENST00000580996 2166 ntBASIC18.76■□□□□ 0.59
LRRTM4Q86VH4 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC18.76■□□□□ 0.59
LRRTM4Q86VH4 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
LRRTM4Q86VH4 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
LRRTM4Q86VH4 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
LRRTM4Q86VH4 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
LRRTM4Q86VH4 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
LRRTM4Q86VH4 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
LRRTM4Q86VH4 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
LRRTM4Q86VH4 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
LRRTM4Q86VH4 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
LRRTM4Q86VH4 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC18.75■□□□□ 0.59
LRRTM4Q86VH4 GOLGA6L5P-202ENST00000515341 1828 ntBASIC18.75■□□□□ 0.59
LRRTM4Q86VH4 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
LRRTM4Q86VH4 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
LRRTM4Q86VH4 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC18.75■□□□□ 0.59
LRRTM4Q86VH4 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC18.75■□□□□ 0.59
LRRTM4Q86VH4 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
LRRTM4Q86VH4 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC18.75■□□□□ 0.59
LRRTM4Q86VH4 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC18.75■□□□□ 0.59
LRRTM4Q86VH4 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC18.75■□□□□ 0.59
LRRTM4Q86VH4 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC18.75■□□□□ 0.59
LRRTM4Q86VH4 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC18.75■□□□□ 0.59
LRRTM4Q86VH4 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC18.75■□□□□ 0.59
LRRTM4Q86VH4 AC116562.4-202ENST00000641738 218 ntBASIC18.75■□□□□ 0.59
LRRTM4Q86VH4 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
LRRTM4Q86VH4 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
LRRTM4Q86VH4 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
LRRTM4Q86VH4 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
LRRTM4Q86VH4 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
LRRTM4Q86VH4 GAS2L1P1-201ENST00000420145 1480 ntBASIC18.75■□□□□ 0.59
LRRTM4Q86VH4 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
LRRTM4Q86VH4 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
LRRTM4Q86VH4 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
LRRTM4Q86VH4 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
LRRTM4Q86VH4 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
LRRTM4Q86VH4 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC18.75■□□□□ 0.59
LRRTM4Q86VH4 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
LRRTM4Q86VH4 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
LRRTM4Q86VH4 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
LRRTM4Q86VH4 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
LRRTM4Q86VH4 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
LRRTM4Q86VH4 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
LRRTM4Q86VH4 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC18.74■□□□□ 0.59
LRRTM4Q86VH4 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
LRRTM4Q86VH4 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC18.74■□□□□ 0.59
LRRTM4Q86VH4 TEX21P-204ENST00000641479 1693 ntBASIC18.74■□□□□ 0.59
LRRTM4Q86VH4 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC18.74■□□□□ 0.59
LRRTM4Q86VH4 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
LRRTM4Q86VH4 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
LRRTM4Q86VH4 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
LRRTM4Q86VH4 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC18.74■□□□□ 0.59
LRRTM4Q86VH4 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
LRRTM4Q86VH4 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
LRRTM4Q86VH4 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
LRRTM4Q86VH4 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
LRRTM4Q86VH4 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
LRRTM4Q86VH4 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC18.74■□□□□ 0.59
LRRTM4Q86VH4 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
LRRTM4Q86VH4 CLN6-221ENST00000637494 765 ntTSL 5 BASIC18.74■□□□□ 0.59
LRRTM4Q86VH4 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
LRRTM4Q86VH4 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
LRRTM4Q86VH4 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC18.74■□□□□ 0.59
LRRTM4Q86VH4 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
LRRTM4Q86VH4 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
LRRTM4Q86VH4 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
LRRTM4Q86VH4 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
LRRTM4Q86VH4 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
LRRTM4Q86VH4 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
LRRTM4Q86VH4 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
LRRTM4Q86VH4 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
LRRTM4Q86VH4 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
LRRTM4Q86VH4 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
LRRTM4Q86VH4 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
LRRTM4Q86VH4 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC18.73■□□□□ 0.59
LRRTM4Q86VH4 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
LRRTM4Q86VH4 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
LRRTM4Q86VH4 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
LRRTM4Q86VH4 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
LRRTM4Q86VH4 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms