Protein–RNA interactions for Protein: Q7Z3V4

UBE3B, Ubiquitin-protein ligase E3B, humanhuman

Predictions only

Length 1,068 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3BQ7Z3V4 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
UBE3BQ7Z3V4 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC23.87■■□□□ 1.41
UBE3BQ7Z3V4 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC23.86■■□□□ 1.41
UBE3BQ7Z3V4 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC23.86■■□□□ 1.41
UBE3BQ7Z3V4 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
UBE3BQ7Z3V4 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC23.86■■□□□ 1.41
UBE3BQ7Z3V4 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
UBE3BQ7Z3V4 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC23.86■■□□□ 1.41
UBE3BQ7Z3V4 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
UBE3BQ7Z3V4 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC23.86■■□□□ 1.41
UBE3BQ7Z3V4 LTBR-211ENST00000543190 785 ntTSL 3 BASIC23.86■■□□□ 1.41
UBE3BQ7Z3V4 NT5C-211ENST00000582170 653 ntTSL 3 BASIC23.86■■□□□ 1.41
UBE3BQ7Z3V4 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC23.86■■□□□ 1.41
UBE3BQ7Z3V4 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC23.86■■□□□ 1.41
UBE3BQ7Z3V4 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC23.86■■□□□ 1.41
UBE3BQ7Z3V4 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
UBE3BQ7Z3V4 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC23.86■■□□□ 1.41
UBE3BQ7Z3V4 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC23.86■■□□□ 1.41
UBE3BQ7Z3V4 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC23.86■■□□□ 1.41
UBE3BQ7Z3V4 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
UBE3BQ7Z3V4 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC23.85■■□□□ 1.41
UBE3BQ7Z3V4 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
UBE3BQ7Z3V4 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC23.85■■□□□ 1.41
UBE3BQ7Z3V4 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
UBE3BQ7Z3V4 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC23.85■■□□□ 1.41
UBE3BQ7Z3V4 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
UBE3BQ7Z3V4 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
UBE3BQ7Z3V4 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
UBE3BQ7Z3V4 AC008622.2-201ENST00000617006 1229 ntBASIC23.85■■□□□ 1.41
UBE3BQ7Z3V4 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC23.85■■□□□ 1.41
UBE3BQ7Z3V4 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
UBE3BQ7Z3V4 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC23.85■■□□□ 1.41
UBE3BQ7Z3V4 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC23.85■■□□□ 1.41
UBE3BQ7Z3V4 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
UBE3BQ7Z3V4 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC23.84■■□□□ 1.41
UBE3BQ7Z3V4 POLI-202ENST00000406285 2030 ntTSL 2 BASIC23.84■■□□□ 1.41
UBE3BQ7Z3V4 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
UBE3BQ7Z3V4 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
UBE3BQ7Z3V4 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC23.84■■□□□ 1.41
UBE3BQ7Z3V4 GUK1-204ENST00000366721 689 ntTSL 3 BASIC23.84■■□□□ 1.41
UBE3BQ7Z3V4 COX11P1-201ENST00000489116 835 ntBASIC23.84■■□□□ 1.41
UBE3BQ7Z3V4 AC063952.2-201ENST00000498792 1227 ntBASIC23.84■■□□□ 1.41
UBE3BQ7Z3V4 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC23.84■■□□□ 1.41
UBE3BQ7Z3V4 AC022616.7-201ENST00000525383 220 ntBASIC23.84■■□□□ 1.41
UBE3BQ7Z3V4 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC23.84■■□□□ 1.41
UBE3BQ7Z3V4 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC23.84■■□□□ 1.41
UBE3BQ7Z3V4 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC23.84■■□□□ 1.41
UBE3BQ7Z3V4 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
UBE3BQ7Z3V4 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
UBE3BQ7Z3V4 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC23.84■■□□□ 1.41
UBE3BQ7Z3V4 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC23.84■■□□□ 1.41
UBE3BQ7Z3V4 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC23.84■■□□□ 1.41
UBE3BQ7Z3V4 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC23.84■■□□□ 1.41
UBE3BQ7Z3V4 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
UBE3BQ7Z3V4 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC23.83■■□□□ 1.41
UBE3BQ7Z3V4 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
UBE3BQ7Z3V4 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC23.83■■□□□ 1.41
UBE3BQ7Z3V4 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC23.83■■□□□ 1.41
UBE3BQ7Z3V4 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
UBE3BQ7Z3V4 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC23.83■■□□□ 1.41
UBE3BQ7Z3V4 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
UBE3BQ7Z3V4 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC23.83■■□□□ 1.41
UBE3BQ7Z3V4 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC23.83■■□□□ 1.41
UBE3BQ7Z3V4 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC23.83■■□□□ 1.41
UBE3BQ7Z3V4 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
UBE3BQ7Z3V4 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC23.83■■□□□ 1.41
UBE3BQ7Z3V4 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC23.83■■□□□ 1.41
UBE3BQ7Z3V4 AC011558.1-201ENST00000623459 338 ntBASIC23.83■■□□□ 1.41
UBE3BQ7Z3V4 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
UBE3BQ7Z3V4 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
UBE3BQ7Z3V4 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
UBE3BQ7Z3V4 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC23.83■■□□□ 1.41
UBE3BQ7Z3V4 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC23.83■■□□□ 1.4
UBE3BQ7Z3V4 TEX21P-204ENST00000641479 1693 ntBASIC23.83■■□□□ 1.4
UBE3BQ7Z3V4 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC23.83■■□□□ 1.4
UBE3BQ7Z3V4 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
UBE3BQ7Z3V4 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
UBE3BQ7Z3V4 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
UBE3BQ7Z3V4 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC23.82■■□□□ 1.4
UBE3BQ7Z3V4 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
UBE3BQ7Z3V4 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
UBE3BQ7Z3V4 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
UBE3BQ7Z3V4 RNF152P1-201ENST00000397754 604 ntBASIC23.82■■□□□ 1.4
UBE3BQ7Z3V4 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
UBE3BQ7Z3V4 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC23.82■■□□□ 1.4
UBE3BQ7Z3V4 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC23.82■■□□□ 1.4
UBE3BQ7Z3V4 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC23.82■■□□□ 1.4
UBE3BQ7Z3V4 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC23.82■■□□□ 1.4
UBE3BQ7Z3V4 AL512604.3-201ENST00000569583 964 ntBASIC23.82■■□□□ 1.4
UBE3BQ7Z3V4 RMI2-205ENST00000576027 818 ntTSL 2 BASIC23.82■■□□□ 1.4
UBE3BQ7Z3V4 AL023973.1-201ENST00000624619 620 ntBASIC23.82■■□□□ 1.4
UBE3BQ7Z3V4 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC23.82■■□□□ 1.4
UBE3BQ7Z3V4 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
UBE3BQ7Z3V4 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
UBE3BQ7Z3V4 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
UBE3BQ7Z3V4 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC23.82■■□□□ 1.4
UBE3BQ7Z3V4 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
UBE3BQ7Z3V4 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC23.81■■□□□ 1.4
UBE3BQ7Z3V4 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC23.81■■□□□ 1.4
UBE3BQ7Z3V4 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC23.81■■□□□ 1.4
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms