Protein–RNA interactions for Protein: Q7RTU7

SCX, Basic helix-loop-helix transcription factor scleraxis, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCXQ7RTU7 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC12.64□□□□□ -0.39
SCXQ7RTU7 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
SCXQ7RTU7 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
SCXQ7RTU7 AL353807.1-201ENST00000427475 662 ntBASIC12.64□□□□□ -0.39
SCXQ7RTU7 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC12.64□□□□□ -0.39
SCXQ7RTU7 KRT16P5-201ENST00000455284 522 ntBASIC12.64□□□□□ -0.39
SCXQ7RTU7 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC12.64□□□□□ -0.39
SCXQ7RTU7 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC12.64□□□□□ -0.39
SCXQ7RTU7 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
SCXQ7RTU7 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC12.64□□□□□ -0.39
SCXQ7RTU7 RPS15-203ENST00000586096 570 ntTSL 2 BASIC12.64□□□□□ -0.39
SCXQ7RTU7 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC12.64□□□□□ -0.39
SCXQ7RTU7 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC12.64□□□□□ -0.39
SCXQ7RTU7 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC12.64□□□□□ -0.39
SCXQ7RTU7 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC12.64□□□□□ -0.39
SCXQ7RTU7 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC12.64□□□□□ -0.39
SCXQ7RTU7 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
SCXQ7RTU7 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
SCXQ7RTU7 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
SCXQ7RTU7 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
SCXQ7RTU7 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
SCXQ7RTU7 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
SCXQ7RTU7 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
SCXQ7RTU7 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
SCXQ7RTU7 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
SCXQ7RTU7 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
SCXQ7RTU7 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
SCXQ7RTU7 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC12.63□□□□□ -0.39
SCXQ7RTU7 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
SCXQ7RTU7 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
SCXQ7RTU7 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
SCXQ7RTU7 AC116562.4-201ENST00000641316 2276 ntBASIC12.63□□□□□ -0.39
SCXQ7RTU7 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
SCXQ7RTU7 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC12.63□□□□□ -0.39
SCXQ7RTU7 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC12.63□□□□□ -0.39
SCXQ7RTU7 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
SCXQ7RTU7 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
SCXQ7RTU7 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
SCXQ7RTU7 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
SCXQ7RTU7 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
SCXQ7RTU7 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
SCXQ7RTU7 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
SCXQ7RTU7 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
SCXQ7RTU7 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
SCXQ7RTU7 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC12.63□□□□□ -0.39
SCXQ7RTU7 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC12.63□□□□□ -0.39
SCXQ7RTU7 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC12.63□□□□□ -0.39
SCXQ7RTU7 AL355075.4-201ENST00000554988 638 ntBASIC12.63□□□□□ -0.39
SCXQ7RTU7 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC12.63□□□□□ -0.39
SCXQ7RTU7 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC12.63□□□□□ -0.39
SCXQ7RTU7 AF186192.3-201ENST00000583427 947 ntBASIC12.63□□□□□ -0.39
SCXQ7RTU7 AC004264.1-201ENST00000608354 794 ntBASIC12.63□□□□□ -0.39
SCXQ7RTU7 AC026471.5-201ENST00000615068 467 ntBASIC12.63□□□□□ -0.39
SCXQ7RTU7 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
SCXQ7RTU7 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
SCXQ7RTU7 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
SCXQ7RTU7 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC12.63□□□□□ -0.39
SCXQ7RTU7 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
SCXQ7RTU7 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
SCXQ7RTU7 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
SCXQ7RTU7 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
SCXQ7RTU7 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC12.63□□□□□ -0.39
SCXQ7RTU7 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
SCXQ7RTU7 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC12.63□□□□□ -0.39
SCXQ7RTU7 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
SCXQ7RTU7 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
SCXQ7RTU7 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
SCXQ7RTU7 AP000974.1-201ENST00000623909 2387 ntBASIC12.63□□□□□ -0.39
SCXQ7RTU7 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
SCXQ7RTU7 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
SCXQ7RTU7 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
SCXQ7RTU7 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC12.62□□□□□ -0.39
SCXQ7RTU7 KRT8P20-201ENST00000423953 1409 ntBASIC12.62□□□□□ -0.39
SCXQ7RTU7 PTBP1P-201ENST00000554374 1601 ntBASIC12.62□□□□□ -0.39
SCXQ7RTU7 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
SCXQ7RTU7 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
SCXQ7RTU7 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC12.62□□□□□ -0.39
SCXQ7RTU7 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
SCXQ7RTU7 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
SCXQ7RTU7 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
SCXQ7RTU7 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC12.62□□□□□ -0.39
SCXQ7RTU7 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC12.62□□□□□ -0.39
SCXQ7RTU7 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
SCXQ7RTU7 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC12.62□□□□□ -0.39
SCXQ7RTU7 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
SCXQ7RTU7 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
SCXQ7RTU7 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC12.62□□□□□ -0.39
SCXQ7RTU7 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC12.62□□□□□ -0.39
SCXQ7RTU7 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
SCXQ7RTU7 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
SCXQ7RTU7 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
SCXQ7RTU7 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
SCXQ7RTU7 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC12.62□□□□□ -0.39
SCXQ7RTU7 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
SCXQ7RTU7 TREX2-204ENST00000370212 861 ntTSL 5 BASIC12.62□□□□□ -0.39
SCXQ7RTU7 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
SCXQ7RTU7 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC12.62□□□□□ -0.39
SCXQ7RTU7 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
SCXQ7RTU7 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
SCXQ7RTU7 TSPY15P-201ENST00000457163 923 ntBASIC12.62□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms