Protein–RNA interactions for Protein: Q6ZR62

RTL4, Retrotransposon Gag-like protein 4, humanhuman

Predictions only

Length 310 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL4Q6ZR62 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC17.91■□□□□ 0.46
RTL4Q6ZR62 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC17.91■□□□□ 0.46
RTL4Q6ZR62 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC17.91■□□□□ 0.46
RTL4Q6ZR62 SNX21-213ENST00000614929 587 ntTSL 5 BASIC17.91■□□□□ 0.46
RTL4Q6ZR62 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RTL4Q6ZR62 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
RTL4Q6ZR62 BCL2-203ENST00000589955 5011 ntBASIC17.91■□□□□ 0.46
RTL4Q6ZR62 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RTL4Q6ZR62 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
RTL4Q6ZR62 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RTL4Q6ZR62 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RTL4Q6ZR62 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC17.91■□□□□ 0.46
RTL4Q6ZR62 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RTL4Q6ZR62 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
RTL4Q6ZR62 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
RTL4Q6ZR62 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RTL4Q6ZR62 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
RTL4Q6ZR62 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
RTL4Q6ZR62 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
RTL4Q6ZR62 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
RTL4Q6ZR62 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
RTL4Q6ZR62 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC17.9■□□□□ 0.46
RTL4Q6ZR62 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
RTL4Q6ZR62 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
RTL4Q6ZR62 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
RTL4Q6ZR62 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC17.9■□□□□ 0.46
RTL4Q6ZR62 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC17.9■□□□□ 0.46
RTL4Q6ZR62 GXYLT1P3-201ENST00000453058 1193 ntBASIC17.9■□□□□ 0.46
RTL4Q6ZR62 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
RTL4Q6ZR62 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC17.9■□□□□ 0.46
RTL4Q6ZR62 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC17.9■□□□□ 0.46
RTL4Q6ZR62 ARL16-209ENST00000573715 763 ntTSL 3 BASIC17.9■□□□□ 0.46
RTL4Q6ZR62 ARL16-211ENST00000576135 694 ntTSL 3 BASIC17.9■□□□□ 0.46
RTL4Q6ZR62 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC17.9■□□□□ 0.46
RTL4Q6ZR62 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC17.9■□□□□ 0.46
RTL4Q6ZR62 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC17.9■□□□□ 0.46
RTL4Q6ZR62 AC073912.3-201ENST00000624414 853 ntBASIC17.9■□□□□ 0.46
RTL4Q6ZR62 AL031985.4-201ENST00000642138 673 ntBASIC17.9■□□□□ 0.46
RTL4Q6ZR62 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
RTL4Q6ZR62 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
RTL4Q6ZR62 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
RTL4Q6ZR62 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
RTL4Q6ZR62 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
RTL4Q6ZR62 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
RTL4Q6ZR62 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
RTL4Q6ZR62 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC17.9■□□□□ 0.46
RTL4Q6ZR62 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC17.9■□□□□ 0.46
RTL4Q6ZR62 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
RTL4Q6ZR62 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
RTL4Q6ZR62 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC17.9■□□□□ 0.46
RTL4Q6ZR62 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
RTL4Q6ZR62 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
RTL4Q6ZR62 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.46
RTL4Q6ZR62 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
RTL4Q6ZR62 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
RTL4Q6ZR62 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
RTL4Q6ZR62 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC17.89■□□□□ 0.45
RTL4Q6ZR62 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
RTL4Q6ZR62 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
RTL4Q6ZR62 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC17.89■□□□□ 0.45
RTL4Q6ZR62 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC17.89■□□□□ 0.45
RTL4Q6ZR62 NME1-207ENST00000480143 964 ntTSL 2 BASIC17.89■□□□□ 0.45
RTL4Q6ZR62 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
RTL4Q6ZR62 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC17.89■□□□□ 0.45
RTL4Q6ZR62 BX088651.1-201ENST00000540551 451 ntBASIC17.89■□□□□ 0.45
RTL4Q6ZR62 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC17.89■□□□□ 0.45
RTL4Q6ZR62 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
RTL4Q6ZR62 AL355075.4-201ENST00000554988 638 ntBASIC17.89■□□□□ 0.45
RTL4Q6ZR62 AC026271.3-201ENST00000571884 352 ntBASIC17.89■□□□□ 0.45
RTL4Q6ZR62 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC17.89■□□□□ 0.45
RTL4Q6ZR62 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
RTL4Q6ZR62 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC17.89■□□□□ 0.45
RTL4Q6ZR62 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
RTL4Q6ZR62 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC17.89■□□□□ 0.45
RTL4Q6ZR62 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
RTL4Q6ZR62 AC090340.1-201ENST00000620778 4980 ntBASIC17.89■□□□□ 0.45
RTL4Q6ZR62 AC026471.1-201ENST00000564629 3026 ntBASIC17.89■□□□□ 0.45
RTL4Q6ZR62 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
RTL4Q6ZR62 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
RTL4Q6ZR62 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
RTL4Q6ZR62 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
RTL4Q6ZR62 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
RTL4Q6ZR62 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
RTL4Q6ZR62 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
RTL4Q6ZR62 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC17.88■□□□□ 0.45
RTL4Q6ZR62 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
RTL4Q6ZR62 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC17.88■□□□□ 0.45
RTL4Q6ZR62 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC17.88■□□□□ 0.45
RTL4Q6ZR62 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
RTL4Q6ZR62 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC17.88■□□□□ 0.45
RTL4Q6ZR62 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
RTL4Q6ZR62 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC17.88■□□□□ 0.45
RTL4Q6ZR62 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC17.88■□□□□ 0.45
RTL4Q6ZR62 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC17.88■□□□□ 0.45
RTL4Q6ZR62 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC17.88■□□□□ 0.45
RTL4Q6ZR62 AC131212.4-201ENST00000623606 975 ntBASIC17.88■□□□□ 0.45
RTL4Q6ZR62 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC17.88■□□□□ 0.45
RTL4Q6ZR62 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
RTL4Q6ZR62 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
RTL4Q6ZR62 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC17.88■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms