Protein–RNA interactions for Protein: Q5THJ4

VPS13D, Vacuolar protein sorting-associated protein 13D, humanhuman

Predictions only

Length 4,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13DQ5THJ4 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC12.87□□□□□ -0.35
VPS13DQ5THJ4 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
VPS13DQ5THJ4 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
VPS13DQ5THJ4 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC12.87□□□□□ -0.35
VPS13DQ5THJ4 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
VPS13DQ5THJ4 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
VPS13DQ5THJ4 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
VPS13DQ5THJ4 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
VPS13DQ5THJ4 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
VPS13DQ5THJ4 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
VPS13DQ5THJ4 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
VPS13DQ5THJ4 PPIE-208ENST00000470213 927 ntTSL 3 BASIC12.86□□□□□ -0.35
VPS13DQ5THJ4 AC034232.1-201ENST00000506026 1064 ntBASIC12.86□□□□□ -0.35
VPS13DQ5THJ4 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
VPS13DQ5THJ4 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
VPS13DQ5THJ4 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
VPS13DQ5THJ4 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
VPS13DQ5THJ4 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
VPS13DQ5THJ4 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
VPS13DQ5THJ4 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
VPS13DQ5THJ4 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
VPS13DQ5THJ4 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
VPS13DQ5THJ4 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
VPS13DQ5THJ4 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
VPS13DQ5THJ4 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
VPS13DQ5THJ4 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
VPS13DQ5THJ4 AC106795.1-205ENST00000512851 1056 ntBASIC12.86□□□□□ -0.35
VPS13DQ5THJ4 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC12.86□□□□□ -0.35
VPS13DQ5THJ4 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC12.86□□□□□ -0.35
VPS13DQ5THJ4 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
VPS13DQ5THJ4 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
VPS13DQ5THJ4 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
VPS13DQ5THJ4 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
VPS13DQ5THJ4 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
VPS13DQ5THJ4 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
VPS13DQ5THJ4 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
VPS13DQ5THJ4 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
VPS13DQ5THJ4 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
VPS13DQ5THJ4 AL391807.1-203ENST00000604392 2365 ntBASIC12.86□□□□□ -0.35
VPS13DQ5THJ4 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC12.86□□□□□ -0.35
VPS13DQ5THJ4 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC12.86□□□□□ -0.35
VPS13DQ5THJ4 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
VPS13DQ5THJ4 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
VPS13DQ5THJ4 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
VPS13DQ5THJ4 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC12.85□□□□□ -0.35
VPS13DQ5THJ4 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC12.85□□□□□ -0.35
VPS13DQ5THJ4 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
VPS13DQ5THJ4 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC12.85□□□□□ -0.35
VPS13DQ5THJ4 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC12.85□□□□□ -0.35
VPS13DQ5THJ4 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC12.85□□□□□ -0.35
VPS13DQ5THJ4 AC092329.2-201ENST00000598402 547 ntBASIC12.85□□□□□ -0.35
VPS13DQ5THJ4 SPEG-225ENST00000617028 815 ntTSL 5 BASIC12.85□□□□□ -0.35
VPS13DQ5THJ4 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC12.85□□□□□ -0.35
VPS13DQ5THJ4 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
VPS13DQ5THJ4 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
VPS13DQ5THJ4 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
VPS13DQ5THJ4 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
VPS13DQ5THJ4 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC12.85□□□□□ -0.35
VPS13DQ5THJ4 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
VPS13DQ5THJ4 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC12.85□□□□□ -0.35
VPS13DQ5THJ4 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
VPS13DQ5THJ4 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC12.85□□□□□ -0.35
VPS13DQ5THJ4 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
VPS13DQ5THJ4 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
VPS13DQ5THJ4 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
VPS13DQ5THJ4 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
VPS13DQ5THJ4 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC12.85□□□□□ -0.35
VPS13DQ5THJ4 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
VPS13DQ5THJ4 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC12.85□□□□□ -0.35
VPS13DQ5THJ4 CALM1-205ENST00000553542 877 ntTSL 5 BASIC12.85□□□□□ -0.35
VPS13DQ5THJ4 PRELID1P1-202ENST00000567272 903 ntBASIC12.85□□□□□ -0.35
VPS13DQ5THJ4 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC12.85□□□□□ -0.35
VPS13DQ5THJ4 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
VPS13DQ5THJ4 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
VPS13DQ5THJ4 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
VPS13DQ5THJ4 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
VPS13DQ5THJ4 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
VPS13DQ5THJ4 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
VPS13DQ5THJ4 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
VPS13DQ5THJ4 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
VPS13DQ5THJ4 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
VPS13DQ5THJ4 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
VPS13DQ5THJ4 DFFB-203ENST00000341385 572 ntTSL 5 BASIC12.85□□□□□ -0.35
VPS13DQ5THJ4 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
VPS13DQ5THJ4 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC12.85□□□□□ -0.35
VPS13DQ5THJ4 AL160237.2-201ENST00000556165 472 ntBASIC12.85□□□□□ -0.35
VPS13DQ5THJ4 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
VPS13DQ5THJ4 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC12.85□□□□□ -0.35
VPS13DQ5THJ4 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
VPS13DQ5THJ4 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
VPS13DQ5THJ4 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
VPS13DQ5THJ4 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
VPS13DQ5THJ4 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
VPS13DQ5THJ4 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC12.84□□□□□ -0.35
VPS13DQ5THJ4 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC12.84□□□□□ -0.35
VPS13DQ5THJ4 MRPL3P1-201ENST00000400109 1033 ntBASIC12.84□□□□□ -0.35
VPS13DQ5THJ4 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC12.84□□□□□ -0.35
VPS13DQ5THJ4 KRT16P4-201ENST00000453883 522 ntBASIC12.84□□□□□ -0.35
VPS13DQ5THJ4 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC12.84□□□□□ -0.35
VPS13DQ5THJ4 AP000867.3-201ENST00000524675 377 ntBASIC12.84□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 50.2 ms