Protein–RNA interactions for Protein: Q2Q1W2

TRIM71, E3 ubiquitin-protein ligase TRIM71, humanhuman

Known RBP Predictions only

Length 868 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM71Q2Q1W2 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
TRIM71Q2Q1W2 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
TRIM71Q2Q1W2 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
TRIM71Q2Q1W2 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
TRIM71Q2Q1W2 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
TRIM71Q2Q1W2 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
TRIM71Q2Q1W2 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC20.85■□□□□ 0.93
TRIM71Q2Q1W2 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
TRIM71Q2Q1W2 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
TRIM71Q2Q1W2 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
TRIM71Q2Q1W2 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
TRIM71Q2Q1W2 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
TRIM71Q2Q1W2 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
TRIM71Q2Q1W2 AL645929.1-201ENST00000420084 975 ntBASIC20.85■□□□□ 0.93
TRIM71Q2Q1W2 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC20.85■□□□□ 0.93
TRIM71Q2Q1W2 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC20.85■□□□□ 0.93
TRIM71Q2Q1W2 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC20.85■□□□□ 0.93
TRIM71Q2Q1W2 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
TRIM71Q2Q1W2 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
TRIM71Q2Q1W2 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
TRIM71Q2Q1W2 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
TRIM71Q2Q1W2 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
TRIM71Q2Q1W2 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
TRIM71Q2Q1W2 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
TRIM71Q2Q1W2 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
TRIM71Q2Q1W2 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
TRIM71Q2Q1W2 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC20.84■□□□□ 0.93
TRIM71Q2Q1W2 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
TRIM71Q2Q1W2 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
TRIM71Q2Q1W2 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
TRIM71Q2Q1W2 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC20.84■□□□□ 0.93
TRIM71Q2Q1W2 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
TRIM71Q2Q1W2 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC20.84■□□□□ 0.93
TRIM71Q2Q1W2 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC20.84■□□□□ 0.93
TRIM71Q2Q1W2 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC20.84■□□□□ 0.93
TRIM71Q2Q1W2 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC20.84■□□□□ 0.93
TRIM71Q2Q1W2 AC092119.3-201ENST00000612618 583 ntBASIC20.84■□□□□ 0.93
TRIM71Q2Q1W2 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC20.84■□□□□ 0.93
TRIM71Q2Q1W2 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC20.84■□□□□ 0.93
TRIM71Q2Q1W2 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
TRIM71Q2Q1W2 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
TRIM71Q2Q1W2 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC20.84■□□□□ 0.93
TRIM71Q2Q1W2 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
TRIM71Q2Q1W2 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
TRIM71Q2Q1W2 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
TRIM71Q2Q1W2 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC20.84■□□□□ 0.93
TRIM71Q2Q1W2 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC20.84■□□□□ 0.93
TRIM71Q2Q1W2 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC20.83■□□□□ 0.93
TRIM71Q2Q1W2 USP39-204ENST00000409766 2033 ntTSL 2 BASIC20.83■□□□□ 0.93
TRIM71Q2Q1W2 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
TRIM71Q2Q1W2 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
TRIM71Q2Q1W2 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
TRIM71Q2Q1W2 GAS2L1P1-201ENST00000420145 1480 ntBASIC20.83■□□□□ 0.93
TRIM71Q2Q1W2 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
TRIM71Q2Q1W2 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC20.83■□□□□ 0.93
TRIM71Q2Q1W2 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
TRIM71Q2Q1W2 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC20.83■□□□□ 0.93
TRIM71Q2Q1W2 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC20.83■□□□□ 0.93
TRIM71Q2Q1W2 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC20.83■□□□□ 0.93
TRIM71Q2Q1W2 PP7080-204ENST00000510714 601 ntTSL 3 BASIC20.83■□□□□ 0.93
TRIM71Q2Q1W2 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC20.83■□□□□ 0.93
TRIM71Q2Q1W2 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.93
TRIM71Q2Q1W2 AC024243.1-201ENST00000609234 778 ntBASIC20.83■□□□□ 0.93
TRIM71Q2Q1W2 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
TRIM71Q2Q1W2 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
TRIM71Q2Q1W2 AC036111.1-201ENST00000533973 1582 ntBASIC20.83■□□□□ 0.92
TRIM71Q2Q1W2 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC20.83■□□□□ 0.92
TRIM71Q2Q1W2 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC20.83■□□□□ 0.92
TRIM71Q2Q1W2 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
TRIM71Q2Q1W2 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
TRIM71Q2Q1W2 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
TRIM71Q2Q1W2 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC20.82■□□□□ 0.92
TRIM71Q2Q1W2 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
TRIM71Q2Q1W2 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC20.82■□□□□ 0.92
TRIM71Q2Q1W2 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
TRIM71Q2Q1W2 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC20.82■□□□□ 0.92
TRIM71Q2Q1W2 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC20.82■□□□□ 0.92
TRIM71Q2Q1W2 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC20.82■□□□□ 0.92
TRIM71Q2Q1W2 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
TRIM71Q2Q1W2 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
TRIM71Q2Q1W2 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC20.82■□□□□ 0.92
TRIM71Q2Q1W2 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC20.82■□□□□ 0.92
TRIM71Q2Q1W2 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
TRIM71Q2Q1W2 AC034232.1-201ENST00000506026 1064 ntBASIC20.82■□□□□ 0.92
TRIM71Q2Q1W2 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC20.82■□□□□ 0.92
TRIM71Q2Q1W2 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
TRIM71Q2Q1W2 GOLGA6L5P-202ENST00000515341 1828 ntBASIC20.82■□□□□ 0.92
TRIM71Q2Q1W2 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
TRIM71Q2Q1W2 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
TRIM71Q2Q1W2 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
TRIM71Q2Q1W2 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC20.82■□□□□ 0.92
TRIM71Q2Q1W2 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
TRIM71Q2Q1W2 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
TRIM71Q2Q1W2 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC20.81■□□□□ 0.92
TRIM71Q2Q1W2 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
TRIM71Q2Q1W2 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
TRIM71Q2Q1W2 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC20.81■□□□□ 0.92
TRIM71Q2Q1W2 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
TRIM71Q2Q1W2 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC20.81■□□□□ 0.92
TRIM71Q2Q1W2 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC20.81■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms