Protein–RNA interactions for Protein: P78395

PRAME, Melanoma antigen preferentially expressed in tumors, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEP78395 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
PRAMEP78395 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
PRAMEP78395 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
PRAMEP78395 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.67
PRAMEP78395 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
PRAMEP78395 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC19.27■□□□□ 0.67
PRAMEP78395 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC19.27■□□□□ 0.67
PRAMEP78395 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC19.27■□□□□ 0.67
PRAMEP78395 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
PRAMEP78395 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PRAMEP78395 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PRAMEP78395 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC19.26■□□□□ 0.67
PRAMEP78395 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC19.26■□□□□ 0.67
PRAMEP78395 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC19.26■□□□□ 0.67
PRAMEP78395 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC19.26■□□□□ 0.67
PRAMEP78395 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC19.26■□□□□ 0.67
PRAMEP78395 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC19.26■□□□□ 0.67
PRAMEP78395 FAM201B-201ENST00000458407 597 ntBASIC19.26■□□□□ 0.67
PRAMEP78395 AC133681.1-201ENST00000465482 601 ntBASIC19.26■□□□□ 0.67
PRAMEP78395 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
PRAMEP78395 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
PRAMEP78395 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
PRAMEP78395 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC19.26■□□□□ 0.67
PRAMEP78395 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PRAMEP78395 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PRAMEP78395 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC19.26■□□□□ 0.67
PRAMEP78395 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
PRAMEP78395 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC19.26■□□□□ 0.67
PRAMEP78395 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC19.26■□□□□ 0.67
PRAMEP78395 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PRAMEP78395 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC19.26■□□□□ 0.67
PRAMEP78395 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PRAMEP78395 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
PRAMEP78395 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
PRAMEP78395 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC19.25■□□□□ 0.67
PRAMEP78395 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC19.25■□□□□ 0.67
PRAMEP78395 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PRAMEP78395 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
PRAMEP78395 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC19.25■□□□□ 0.67
PRAMEP78395 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
PRAMEP78395 AL161938.1-201ENST00000569833 2180 ntBASIC19.25■□□□□ 0.67
PRAMEP78395 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PRAMEP78395 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC19.25■□□□□ 0.67
PRAMEP78395 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC19.25■□□□□ 0.67
PRAMEP78395 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PRAMEP78395 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
PRAMEP78395 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC19.25■□□□□ 0.67
PRAMEP78395 C1QBPP2-201ENST00000528754 825 ntBASIC19.25■□□□□ 0.67
PRAMEP78395 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC19.25■□□□□ 0.67
PRAMEP78395 HLA-A-209ENST00000638375 975 ntBASIC19.25■□□□□ 0.67
PRAMEP78395 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PRAMEP78395 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC19.25■□□□□ 0.67
PRAMEP78395 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
PRAMEP78395 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PRAMEP78395 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
PRAMEP78395 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
PRAMEP78395 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PRAMEP78395 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
PRAMEP78395 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
PRAMEP78395 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC19.25■□□□□ 0.67
PRAMEP78395 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PRAMEP78395 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
PRAMEP78395 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
PRAMEP78395 EML3-217ENST00000531557 2509 ntTSL 5 BASIC19.24■□□□□ 0.67
PRAMEP78395 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
PRAMEP78395 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC19.24■□□□□ 0.67
PRAMEP78395 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PRAMEP78395 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PRAMEP78395 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.24■□□□□ 0.67
PRAMEP78395 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
PRAMEP78395 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC19.24■□□□□ 0.67
PRAMEP78395 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.24■□□□□ 0.67
PRAMEP78395 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC19.24■□□□□ 0.67
PRAMEP78395 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.24■□□□□ 0.67
PRAMEP78395 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC19.24■□□□□ 0.67
PRAMEP78395 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC19.24■□□□□ 0.67
PRAMEP78395 AL160286.2-201ENST00000567150 934 ntBASIC19.24■□□□□ 0.67
PRAMEP78395 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC19.24■□□□□ 0.67
PRAMEP78395 CABP2-204ENST00000636477 941 ntTSL 5 BASIC19.24■□□□□ 0.67
PRAMEP78395 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PRAMEP78395 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PRAMEP78395 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC19.24■□□□□ 0.67
PRAMEP78395 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
PRAMEP78395 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PRAMEP78395 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PRAMEP78395 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
PRAMEP78395 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PRAMEP78395 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
PRAMEP78395 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
PRAMEP78395 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PRAMEP78395 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PRAMEP78395 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
PRAMEP78395 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PRAMEP78395 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
PRAMEP78395 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PRAMEP78395 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC19.23■□□□□ 0.67
PRAMEP78395 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC19.23■□□□□ 0.67
PRAMEP78395 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
PRAMEP78395 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
PRAMEP78395 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC19.23■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms