Protein–RNA interactions for Protein: P68431

HIST1H3A, Histone H3.1, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H3AP68431 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
HIST1H3AP68431 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
HIST1H3AP68431 AL353807.1-201ENST00000427475 662 ntBASIC16.71■□□□□ 0.27
HIST1H3AP68431 PPP1R14BP5-201ENST00000440334 435 ntBASIC16.71■□□□□ 0.27
HIST1H3AP68431 TSPY20P-201ENST00000450910 630 ntBASIC16.71■□□□□ 0.27
HIST1H3AP68431 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC16.71■□□□□ 0.27
HIST1H3AP68431 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
HIST1H3AP68431 AL359736.2-201ENST00000621992 437 ntBASIC16.71■□□□□ 0.27
HIST1H3AP68431 AC131212.4-201ENST00000623606 975 ntBASIC16.71■□□□□ 0.27
HIST1H3AP68431 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
HIST1H3AP68431 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
HIST1H3AP68431 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC16.71■□□□□ 0.27
HIST1H3AP68431 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
HIST1H3AP68431 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
HIST1H3AP68431 AC093503.3-201ENST00000624917 2352 ntBASIC16.71■□□□□ 0.26
HIST1H3AP68431 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
HIST1H3AP68431 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
HIST1H3AP68431 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
HIST1H3AP68431 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC16.7■□□□□ 0.26
HIST1H3AP68431 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
HIST1H3AP68431 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
HIST1H3AP68431 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
HIST1H3AP68431 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
HIST1H3AP68431 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC16.7■□□□□ 0.26
HIST1H3AP68431 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
HIST1H3AP68431 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC16.7■□□□□ 0.26
HIST1H3AP68431 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC16.7■□□□□ 0.26
HIST1H3AP68431 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC16.7■□□□□ 0.26
HIST1H3AP68431 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
HIST1H3AP68431 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
HIST1H3AP68431 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
HIST1H3AP68431 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC16.7■□□□□ 0.26
HIST1H3AP68431 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
HIST1H3AP68431 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC16.7■□□□□ 0.26
HIST1H3AP68431 RPS2P4-201ENST00000476944 856 ntBASIC16.7■□□□□ 0.26
HIST1H3AP68431 AP002982.1-201ENST00000492365 877 ntBASIC16.7■□□□□ 0.26
HIST1H3AP68431 FDX2-207ENST00000494368 584 ntTSL 4 BASIC16.7■□□□□ 0.26
HIST1H3AP68431 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC16.7■□□□□ 0.26
HIST1H3AP68431 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC16.7■□□□□ 0.26
HIST1H3AP68431 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC16.7■□□□□ 0.26
HIST1H3AP68431 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
HIST1H3AP68431 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC16.7■□□□□ 0.26
HIST1H3AP68431 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC16.7■□□□□ 0.26
HIST1H3AP68431 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
HIST1H3AP68431 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
HIST1H3AP68431 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC16.7■□□□□ 0.26
HIST1H3AP68431 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC16.69■□□□□ 0.26
HIST1H3AP68431 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC16.69■□□□□ 0.26
HIST1H3AP68431 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
HIST1H3AP68431 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
HIST1H3AP68431 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
HIST1H3AP68431 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
HIST1H3AP68431 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
HIST1H3AP68431 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
HIST1H3AP68431 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
HIST1H3AP68431 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
HIST1H3AP68431 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC16.69■□□□□ 0.26
HIST1H3AP68431 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
HIST1H3AP68431 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
HIST1H3AP68431 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC16.69■□□□□ 0.26
HIST1H3AP68431 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
HIST1H3AP68431 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC16.69■□□□□ 0.26
HIST1H3AP68431 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
HIST1H3AP68431 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
HIST1H3AP68431 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC16.69■□□□□ 0.26
HIST1H3AP68431 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC16.69■□□□□ 0.26
HIST1H3AP68431 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
HIST1H3AP68431 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
HIST1H3AP68431 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC16.69■□□□□ 0.26
HIST1H3AP68431 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC16.69■□□□□ 0.26
HIST1H3AP68431 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
HIST1H3AP68431 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
HIST1H3AP68431 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
HIST1H3AP68431 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
HIST1H3AP68431 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
HIST1H3AP68431 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
HIST1H3AP68431 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
HIST1H3AP68431 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
HIST1H3AP68431 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
HIST1H3AP68431 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
HIST1H3AP68431 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
HIST1H3AP68431 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
HIST1H3AP68431 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
HIST1H3AP68431 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC16.68■□□□□ 0.26
HIST1H3AP68431 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
HIST1H3AP68431 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
HIST1H3AP68431 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
HIST1H3AP68431 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
HIST1H3AP68431 PRORSD1P-201ENST00000295112 541 ntBASIC16.68■□□□□ 0.26
HIST1H3AP68431 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
HIST1H3AP68431 KRT18P29-201ENST00000397031 1267 ntBASIC16.68■□□□□ 0.26
HIST1H3AP68431 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
HIST1H3AP68431 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
HIST1H3AP68431 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC16.68■□□□□ 0.26
HIST1H3AP68431 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC16.68■□□□□ 0.26
HIST1H3AP68431 TK2-204ENST00000525974 1178 ntTSL 2 BASIC16.68■□□□□ 0.26
HIST1H3AP68431 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
HIST1H3AP68431 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
HIST1H3AP68431 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC16.68■□□□□ 0.26
HIST1H3AP68431 AF186192.3-201ENST00000583427 947 ntBASIC16.68■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms