Protein–RNA interactions for Protein: P67809

YBX1, Nuclease-sensitive element-binding protein 1, humanhuman

Known RBP Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1P67809 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
YBX1P67809 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC18.65■□□□□ 0.58
YBX1P67809 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
YBX1P67809 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
YBX1P67809 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
YBX1P67809 PENK-204ENST00000518770 863 ntTSL 2 BASIC18.65■□□□□ 0.58
YBX1P67809 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC18.65■□□□□ 0.58
YBX1P67809 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC18.65■□□□□ 0.58
YBX1P67809 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC18.65■□□□□ 0.58
YBX1P67809 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC18.65■□□□□ 0.58
YBX1P67809 CD177P1-201ENST00000606252 935 ntBASIC18.65■□□□□ 0.58
YBX1P67809 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC18.65■□□□□ 0.58
YBX1P67809 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
YBX1P67809 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
YBX1P67809 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC18.65■□□□□ 0.58
YBX1P67809 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC18.65■□□□□ 0.58
YBX1P67809 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
YBX1P67809 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
YBX1P67809 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
YBX1P67809 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
YBX1P67809 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
YBX1P67809 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
YBX1P67809 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC18.64■□□□□ 0.57
YBX1P67809 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC18.64■□□□□ 0.57
YBX1P67809 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC18.64■□□□□ 0.57
YBX1P67809 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC18.64■□□□□ 0.57
YBX1P67809 SNORA78-201ENST00000459373 127 ntBASIC18.64■□□□□ 0.57
YBX1P67809 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC18.64■□□□□ 0.57
YBX1P67809 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC18.64■□□□□ 0.57
YBX1P67809 AC073195.1-201ENST00000607241 877 ntBASIC18.64■□□□□ 0.57
YBX1P67809 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
YBX1P67809 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
YBX1P67809 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
YBX1P67809 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC18.64■□□□□ 0.57
YBX1P67809 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC18.64■□□□□ 0.57
YBX1P67809 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
YBX1P67809 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
YBX1P67809 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
YBX1P67809 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
YBX1P67809 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC18.63■□□□□ 0.57
YBX1P67809 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC18.63■□□□□ 0.57
YBX1P67809 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC18.63■□□□□ 0.57
YBX1P67809 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
YBX1P67809 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC18.63■□□□□ 0.57
YBX1P67809 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
YBX1P67809 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
YBX1P67809 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
YBX1P67809 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
YBX1P67809 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
YBX1P67809 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
YBX1P67809 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC18.63■□□□□ 0.57
YBX1P67809 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC18.63■□□□□ 0.57
YBX1P67809 AC004980.1-204ENST00000429707 299 ntBASIC18.63■□□□□ 0.57
YBX1P67809 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC18.63■□□□□ 0.57
YBX1P67809 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
YBX1P67809 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC18.63■□□□□ 0.57
YBX1P67809 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC18.63■□□□□ 0.57
YBX1P67809 AL445675.2-201ENST00000620291 557 ntBASIC18.63■□□□□ 0.57
YBX1P67809 ADK-206ENST00000541550 2222 ntTSL 2 BASIC18.63■□□□□ 0.57
YBX1P67809 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
YBX1P67809 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
YBX1P67809 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
YBX1P67809 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
YBX1P67809 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
YBX1P67809 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
YBX1P67809 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
YBX1P67809 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
YBX1P67809 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
YBX1P67809 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC18.63■□□□□ 0.57
YBX1P67809 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
YBX1P67809 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
YBX1P67809 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
YBX1P67809 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
YBX1P67809 KSR1P1-201ENST00000446298 240 ntBASIC18.62■□□□□ 0.57
YBX1P67809 TSPY15P-201ENST00000457163 923 ntBASIC18.62■□□□□ 0.57
YBX1P67809 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC18.62■□□□□ 0.57
YBX1P67809 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
YBX1P67809 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC18.62■□□□□ 0.57
YBX1P67809 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
YBX1P67809 AL135905.2-201ENST00000584934 1404 ntBASIC18.62■□□□□ 0.57
YBX1P67809 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC18.62■□□□□ 0.57
YBX1P67809 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC18.62■□□□□ 0.57
YBX1P67809 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
YBX1P67809 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC18.62■□□□□ 0.57
YBX1P67809 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
YBX1P67809 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
YBX1P67809 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
YBX1P67809 AL161938.1-201ENST00000569833 2180 ntBASIC18.62■□□□□ 0.57
YBX1P67809 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
YBX1P67809 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
YBX1P67809 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
YBX1P67809 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC18.61■□□□□ 0.57
YBX1P67809 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC18.61■□□□□ 0.57
YBX1P67809 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
YBX1P67809 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC18.61■□□□□ 0.57
YBX1P67809 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
YBX1P67809 AL138781.2-201ENST00000617896 1843 ntBASIC18.61■□□□□ 0.57
YBX1P67809 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC18.61■□□□□ 0.57
YBX1P67809 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
YBX1P67809 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms