Protein–RNA interactions for Protein: P61966

AP1S1, AP-1 complex subunit sigma-1A, humanhuman

Predictions only

Length 158 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S1P61966 CA15P1-201ENST00000481698 905 ntBASIC19.26■□□□□ 0.67
AP1S1P61966 C2orf69P3-201ENST00000565542 1120 ntBASIC19.26■□□□□ 0.67
AP1S1P61966 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC19.26■□□□□ 0.67
AP1S1P61966 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
AP1S1P61966 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
AP1S1P61966 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
AP1S1P61966 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC19.26■□□□□ 0.67
AP1S1P61966 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC19.25■□□□□ 0.67
AP1S1P61966 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
AP1S1P61966 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
AP1S1P61966 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
AP1S1P61966 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
AP1S1P61966 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC19.25■□□□□ 0.67
AP1S1P61966 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
AP1S1P61966 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC19.25■□□□□ 0.67
AP1S1P61966 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC19.25■□□□□ 0.67
AP1S1P61966 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC19.25■□□□□ 0.67
AP1S1P61966 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC19.25■□□□□ 0.67
AP1S1P61966 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
AP1S1P61966 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
AP1S1P61966 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
AP1S1P61966 AC087499.1-201ENST00000418141 1075 ntBASIC19.25■□□□□ 0.67
AP1S1P61966 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
AP1S1P61966 NAPSB-206ENST00000562112 1266 ntBASIC19.25■□□□□ 0.67
AP1S1P61966 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC19.25■□□□□ 0.67
AP1S1P61966 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC19.25■□□□□ 0.67
AP1S1P61966 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
AP1S1P61966 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
AP1S1P61966 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC19.25■□□□□ 0.67
AP1S1P61966 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
AP1S1P61966 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC19.25■□□□□ 0.67
AP1S1P61966 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
AP1S1P61966 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC19.25■□□□□ 0.67
AP1S1P61966 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
AP1S1P61966 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
AP1S1P61966 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC19.24■□□□□ 0.67
AP1S1P61966 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
AP1S1P61966 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
AP1S1P61966 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
AP1S1P61966 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC19.24■□□□□ 0.67
AP1S1P61966 IRX1P1-201ENST00000438849 1838 ntBASIC19.24■□□□□ 0.67
AP1S1P61966 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
AP1S1P61966 PRR31-201ENST00000371629 978 ntTSL 2 BASIC19.24■□□□□ 0.67
AP1S1P61966 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC19.24■□□□□ 0.67
AP1S1P61966 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC19.24■□□□□ 0.67
AP1S1P61966 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC19.24■□□□□ 0.67
AP1S1P61966 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC19.24■□□□□ 0.67
AP1S1P61966 RPS20-210ENST00000523936 899 ntTSL 2 BASIC19.24■□□□□ 0.67
AP1S1P61966 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC19.24■□□□□ 0.67
AP1S1P61966 FEM1AP3-201ENST00000403722 1741 ntBASIC19.24■□□□□ 0.67
AP1S1P61966 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC19.24■□□□□ 0.67
AP1S1P61966 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC19.24■□□□□ 0.67
AP1S1P61966 FP475955.4-201ENST00000623131 1990 ntBASIC19.24■□□□□ 0.67
AP1S1P61966 KRT8P9-201ENST00000558927 1449 ntBASIC19.24■□□□□ 0.67
AP1S1P61966 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
AP1S1P61966 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
AP1S1P61966 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
AP1S1P61966 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
AP1S1P61966 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC19.23■□□□□ 0.67
AP1S1P61966 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
AP1S1P61966 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
AP1S1P61966 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
AP1S1P61966 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
AP1S1P61966 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
AP1S1P61966 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
AP1S1P61966 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC19.23■□□□□ 0.67
AP1S1P61966 SLC25A1P2-201ENST00000430693 912 ntBASIC19.23■□□□□ 0.67
AP1S1P61966 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
AP1S1P61966 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC19.23■□□□□ 0.67
AP1S1P61966 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
AP1S1P61966 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
AP1S1P61966 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
AP1S1P61966 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC19.23■□□□□ 0.67
AP1S1P61966 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC19.23■□□□□ 0.67
AP1S1P61966 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
AP1S1P61966 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC19.23■□□□□ 0.67
AP1S1P61966 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
AP1S1P61966 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
AP1S1P61966 UBQLN4P1-201ENST00000461599 1801 ntBASIC19.23■□□□□ 0.67
AP1S1P61966 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC19.23■□□□□ 0.67
AP1S1P61966 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
AP1S1P61966 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
AP1S1P61966 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
AP1S1P61966 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
AP1S1P61966 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC19.22■□□□□ 0.67
AP1S1P61966 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
AP1S1P61966 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
AP1S1P61966 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
AP1S1P61966 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC19.22■□□□□ 0.67
AP1S1P61966 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC19.22■□□□□ 0.67
AP1S1P61966 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC19.22■□□□□ 0.67
AP1S1P61966 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC19.22■□□□□ 0.67
AP1S1P61966 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC19.22■□□□□ 0.67
AP1S1P61966 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC19.22■□□□□ 0.67
AP1S1P61966 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC19.22■□□□□ 0.67
AP1S1P61966 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
AP1S1P61966 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC19.22■□□□□ 0.67
AP1S1P61966 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC19.22■□□□□ 0.67
AP1S1P61966 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
AP1S1P61966 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 18.3 ms