Protein–RNA interactions for Protein: P61077

UBE2D3, Ubiquitin-conjugating enzyme E2 D3, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3P61077 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC13.59□□□□□ -0.23
UBE2D3P61077 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
UBE2D3P61077 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
UBE2D3P61077 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC13.59□□□□□ -0.23
UBE2D3P61077 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
UBE2D3P61077 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC13.59□□□□□ -0.23
UBE2D3P61077 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
UBE2D3P61077 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
UBE2D3P61077 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
UBE2D3P61077 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
UBE2D3P61077 AC135050.7-201ENST00000624508 2218 ntBASIC13.59□□□□□ -0.23
UBE2D3P61077 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
UBE2D3P61077 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
UBE2D3P61077 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
UBE2D3P61077 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC13.59□□□□□ -0.23
UBE2D3P61077 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
UBE2D3P61077 KRT8P8-201ENST00000434750 1448 ntBASIC13.59□□□□□ -0.23
UBE2D3P61077 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
UBE2D3P61077 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
UBE2D3P61077 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
UBE2D3P61077 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
UBE2D3P61077 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
UBE2D3P61077 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
UBE2D3P61077 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
UBE2D3P61077 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
UBE2D3P61077 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC13.59□□□□□ -0.23
UBE2D3P61077 PNMA6B-201ENST00000538162 1200 ntBASIC13.59□□□□□ -0.23
UBE2D3P61077 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC13.59□□□□□ -0.23
UBE2D3P61077 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC13.59□□□□□ -0.23
UBE2D3P61077 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
UBE2D3P61077 ANKRD18DP-204ENST00000455355 1975 ntBASIC13.59□□□□□ -0.23
UBE2D3P61077 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
UBE2D3P61077 AL161938.1-201ENST00000569833 2180 ntBASIC13.59□□□□□ -0.23
UBE2D3P61077 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
UBE2D3P61077 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC13.59□□□□□ -0.23
UBE2D3P61077 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
UBE2D3P61077 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
UBE2D3P61077 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC13.59□□□□□ -0.23
UBE2D3P61077 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
UBE2D3P61077 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC13.59□□□□□ -0.23
UBE2D3P61077 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
UBE2D3P61077 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
UBE2D3P61077 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
UBE2D3P61077 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
UBE2D3P61077 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
UBE2D3P61077 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
UBE2D3P61077 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
UBE2D3P61077 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
UBE2D3P61077 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
UBE2D3P61077 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC13.59□□□□□ -0.23
UBE2D3P61077 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
UBE2D3P61077 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC13.58□□□□□ -0.23
UBE2D3P61077 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC13.58□□□□□ -0.23
UBE2D3P61077 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.23
UBE2D3P61077 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.23
UBE2D3P61077 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC13.58□□□□□ -0.23
UBE2D3P61077 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
UBE2D3P61077 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
UBE2D3P61077 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC13.58□□□□□ -0.24
UBE2D3P61077 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC13.58□□□□□ -0.24
UBE2D3P61077 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC13.58□□□□□ -0.24
UBE2D3P61077 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
UBE2D3P61077 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
UBE2D3P61077 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
UBE2D3P61077 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC13.58□□□□□ -0.24
UBE2D3P61077 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC13.58□□□□□ -0.24
UBE2D3P61077 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
UBE2D3P61077 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
UBE2D3P61077 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC13.58□□□□□ -0.24
UBE2D3P61077 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
UBE2D3P61077 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC13.58□□□□□ -0.24
UBE2D3P61077 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC13.58□□□□□ -0.24
UBE2D3P61077 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC13.58□□□□□ -0.24
UBE2D3P61077 SLC29A4P2-201ENST00000504749 1089 ntBASIC13.58□□□□□ -0.24
UBE2D3P61077 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC13.58□□□□□ -0.24
UBE2D3P61077 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC13.58□□□□□ -0.24
UBE2D3P61077 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC13.58□□□□□ -0.24
UBE2D3P61077 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC13.58□□□□□ -0.24
UBE2D3P61077 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
UBE2D3P61077 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
UBE2D3P61077 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
UBE2D3P61077 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
UBE2D3P61077 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
UBE2D3P61077 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
UBE2D3P61077 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
UBE2D3P61077 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC13.58□□□□□ -0.24
UBE2D3P61077 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
UBE2D3P61077 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
UBE2D3P61077 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC13.57□□□□□ -0.24
UBE2D3P61077 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
UBE2D3P61077 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC13.57□□□□□ -0.24
UBE2D3P61077 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
UBE2D3P61077 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
UBE2D3P61077 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
UBE2D3P61077 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC13.57□□□□□ -0.24
UBE2D3P61077 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
UBE2D3P61077 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
UBE2D3P61077 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
UBE2D3P61077 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
UBE2D3P61077 MAP2K4P1-201ENST00000438453 1195 ntBASIC13.57□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms