Protein–RNA interactions for Protein: P58304

VSX2, Visual system homeobox 2, humanhuman

Predicted RBP Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSX2P58304 CYP2D8P-201ENST00000433633 1490 ntBASIC18.3■□□□□ 0.52
VSX2P58304 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC18.3■□□□□ 0.52
VSX2P58304 Z82202.1-201ENST00000623446 1880 ntBASIC18.3■□□□□ 0.52
VSX2P58304 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
VSX2P58304 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
VSX2P58304 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
VSX2P58304 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
VSX2P58304 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
VSX2P58304 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC18.3■□□□□ 0.52
VSX2P58304 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
VSX2P58304 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC18.3■□□□□ 0.52
VSX2P58304 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC18.29■□□□□ 0.52
VSX2P58304 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
VSX2P58304 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
VSX2P58304 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
VSX2P58304 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
VSX2P58304 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC18.29■□□□□ 0.52
VSX2P58304 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC18.29■□□□□ 0.52
VSX2P58304 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
VSX2P58304 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC18.29■□□□□ 0.52
VSX2P58304 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC18.29■□□□□ 0.52
VSX2P58304 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
VSX2P58304 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
VSX2P58304 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC18.29■□□□□ 0.52
VSX2P58304 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
VSX2P58304 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
VSX2P58304 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC18.29■□□□□ 0.52
VSX2P58304 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC18.29■□□□□ 0.52
VSX2P58304 NAPSB-206ENST00000562112 1266 ntBASIC18.29■□□□□ 0.52
VSX2P58304 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC18.29■□□□□ 0.52
VSX2P58304 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC18.29■□□□□ 0.52
VSX2P58304 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC18.29■□□□□ 0.52
VSX2P58304 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC18.29■□□□□ 0.52
VSX2P58304 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC18.29■□□□□ 0.52
VSX2P58304 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
VSX2P58304 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
VSX2P58304 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
VSX2P58304 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
VSX2P58304 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
VSX2P58304 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
VSX2P58304 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
VSX2P58304 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
VSX2P58304 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
VSX2P58304 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
VSX2P58304 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
VSX2P58304 PRR31-201ENST00000371629 978 ntTSL 2 BASIC18.28■□□□□ 0.52
VSX2P58304 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC18.28■□□□□ 0.52
VSX2P58304 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
VSX2P58304 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC18.28■□□□□ 0.52
VSX2P58304 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC18.28■□□□□ 0.52
VSX2P58304 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC18.28■□□□□ 0.52
VSX2P58304 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
VSX2P58304 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC18.28■□□□□ 0.52
VSX2P58304 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC18.28■□□□□ 0.52
VSX2P58304 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
VSX2P58304 LINC01023-201ENST00000606054 436 ntBASIC18.28■□□□□ 0.52
VSX2P58304 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
VSX2P58304 KRT8P11-201ENST00000409686 1436 ntBASIC18.28■□□□□ 0.52
VSX2P58304 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
VSX2P58304 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
VSX2P58304 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
VSX2P58304 AC096733.2-201ENST00000609937 1394 ntBASIC18.28■□□□□ 0.52
VSX2P58304 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC18.28■□□□□ 0.52
VSX2P58304 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC18.27■□□□□ 0.52
VSX2P58304 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
VSX2P58304 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
VSX2P58304 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC18.27■□□□□ 0.52
VSX2P58304 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
VSX2P58304 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
VSX2P58304 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC18.27■□□□□ 0.52
VSX2P58304 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
VSX2P58304 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC18.27■□□□□ 0.52
VSX2P58304 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC18.27■□□□□ 0.52
VSX2P58304 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
VSX2P58304 C2orf69P3-201ENST00000565542 1120 ntBASIC18.27■□□□□ 0.52
VSX2P58304 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
VSX2P58304 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC18.27■□□□□ 0.51
VSX2P58304 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
VSX2P58304 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.51
VSX2P58304 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.51
VSX2P58304 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
VSX2P58304 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC18.27■□□□□ 0.51
VSX2P58304 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.51
VSX2P58304 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
VSX2P58304 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
VSX2P58304 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.51
VSX2P58304 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC18.27■□□□□ 0.51
VSX2P58304 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
VSX2P58304 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC18.26■□□□□ 0.51
VSX2P58304 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
VSX2P58304 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC18.26■□□□□ 0.51
VSX2P58304 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
VSX2P58304 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC18.26■□□□□ 0.51
VSX2P58304 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
VSX2P58304 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC18.26■□□□□ 0.51
VSX2P58304 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
VSX2P58304 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC18.26■□□□□ 0.51
VSX2P58304 AC010947.1-201ENST00000623454 693 ntBASIC18.26■□□□□ 0.51
VSX2P58304 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
VSX2P58304 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC18.26■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 50.3 ms