Protein–RNA interactions for Protein: P55287

CDH11, Cadherin-11, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11P55287 TEX21P-204ENST00000641479 1693 ntBASIC17.5■□□□□ 0.39
CDH11P55287 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC17.5■□□□□ 0.39
CDH11P55287 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
CDH11P55287 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC17.5■□□□□ 0.39
CDH11P55287 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
CDH11P55287 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC17.5■□□□□ 0.39
CDH11P55287 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CDH11P55287 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC17.5■□□□□ 0.39
CDH11P55287 AC018553.1-201ENST00000616682 1458 ntBASIC17.5■□□□□ 0.39
CDH11P55287 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CDH11P55287 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC17.5■□□□□ 0.39
CDH11P55287 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
CDH11P55287 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CDH11P55287 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CDH11P55287 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC17.49■□□□□ 0.39
CDH11P55287 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CDH11P55287 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
CDH11P55287 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CDH11P55287 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CDH11P55287 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC17.49■□□□□ 0.39
CDH11P55287 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
CDH11P55287 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CDH11P55287 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
CDH11P55287 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
CDH11P55287 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CDH11P55287 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC17.49■□□□□ 0.39
CDH11P55287 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC17.49■□□□□ 0.39
CDH11P55287 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC17.49■□□□□ 0.39
CDH11P55287 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC17.49■□□□□ 0.39
CDH11P55287 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC17.49■□□□□ 0.39
CDH11P55287 FAM197Y4-202ENST00000622692 608 ntBASIC17.49■□□□□ 0.39
CDH11P55287 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CDH11P55287 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
CDH11P55287 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
CDH11P55287 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CDH11P55287 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
CDH11P55287 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CDH11P55287 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CDH11P55287 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CDH11P55287 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
CDH11P55287 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CDH11P55287 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC17.49■□□□□ 0.39
CDH11P55287 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
CDH11P55287 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CDH11P55287 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
CDH11P55287 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CDH11P55287 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC17.48■□□□□ 0.39
CDH11P55287 AC007613.1-201ENST00000572811 2597 ntBASIC17.48■□□□□ 0.39
CDH11P55287 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CDH11P55287 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC17.48■□□□□ 0.39
CDH11P55287 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CDH11P55287 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CDH11P55287 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CDH11P55287 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CDH11P55287 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
CDH11P55287 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC17.48■□□□□ 0.39
CDH11P55287 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CDH11P55287 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CDH11P55287 PEX7-202ENST00000367756 680 ntTSL 3 BASIC17.48■□□□□ 0.39
CDH11P55287 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CDH11P55287 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC17.48■□□□□ 0.39
CDH11P55287 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
CDH11P55287 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
CDH11P55287 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC17.48■□□□□ 0.39
CDH11P55287 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC17.48■□□□□ 0.39
CDH11P55287 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC17.48■□□□□ 0.39
CDH11P55287 AC069544.1-201ENST00000609399 999 ntBASIC17.48■□□□□ 0.39
CDH11P55287 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
CDH11P55287 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CDH11P55287 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CDH11P55287 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CDH11P55287 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC17.48■□□□□ 0.39
CDH11P55287 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC17.48■□□□□ 0.39
CDH11P55287 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC17.48■□□□□ 0.39
CDH11P55287 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC17.48■□□□□ 0.39
CDH11P55287 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CDH11P55287 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CDH11P55287 EML3-217ENST00000531557 2509 ntTSL 5 BASIC17.48■□□□□ 0.39
CDH11P55287 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC17.48■□□□□ 0.39
CDH11P55287 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
CDH11P55287 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC17.47■□□□□ 0.39
CDH11P55287 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CDH11P55287 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC17.47■□□□□ 0.39
CDH11P55287 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
CDH11P55287 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
CDH11P55287 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CDH11P55287 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CDH11P55287 SERP1-205ENST00000487153 657 ntTSL 4 BASIC17.47■□□□□ 0.39
CDH11P55287 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC17.47■□□□□ 0.39
CDH11P55287 C1QBPP2-201ENST00000528754 825 ntBASIC17.47■□□□□ 0.39
CDH11P55287 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CDH11P55287 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CDH11P55287 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CDH11P55287 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC17.47■□□□□ 0.39
CDH11P55287 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CDH11P55287 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CDH11P55287 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CDH11P55287 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CDH11P55287 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC17.47■□□□□ 0.39
CDH11P55287 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 45.7 ms