Protein–RNA interactions for Protein: P54253

ATXN1, Ataxin-1, humanhuman

Known RBP Predictions only

Length 815 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN1P54253 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
ATXN1P54253 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
ATXN1P54253 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC20.07■□□□□ 0.8
ATXN1P54253 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC20.07■□□□□ 0.8
ATXN1P54253 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC20.07■□□□□ 0.8
ATXN1P54253 Z85996.1-201ENST00000494644 937 ntBASIC20.07■□□□□ 0.8
ATXN1P54253 NMU-205ENST00000511469 756 ntTSL 3 BASIC20.07■□□□□ 0.8
ATXN1P54253 METTL23-204ENST00000586752 904 ntTSL 2 BASIC20.07■□□□□ 0.8
ATXN1P54253 AC073195.1-201ENST00000607241 877 ntBASIC20.07■□□□□ 0.8
ATXN1P54253 GLDC-219ENST00000640208 420 ntTSL 2 BASIC20.07■□□□□ 0.8
ATXN1P54253 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC20.07■□□□□ 0.8
ATXN1P54253 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
ATXN1P54253 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC20.07■□□□□ 0.8
ATXN1P54253 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
ATXN1P54253 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
ATXN1P54253 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
ATXN1P54253 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC20.06■□□□□ 0.8
ATXN1P54253 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC20.06■□□□□ 0.8
ATXN1P54253 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC20.06■□□□□ 0.8
ATXN1P54253 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC20.06■□□□□ 0.8
ATXN1P54253 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
ATXN1P54253 AL353807.1-201ENST00000427475 662 ntBASIC20.06■□□□□ 0.8
ATXN1P54253 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC20.06■□□□□ 0.8
ATXN1P54253 KSR1P1-201ENST00000446298 240 ntBASIC20.06■□□□□ 0.8
ATXN1P54253 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC20.06■□□□□ 0.8
ATXN1P54253 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
ATXN1P54253 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC20.06■□□□□ 0.8
ATXN1P54253 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC20.06■□□□□ 0.8
ATXN1P54253 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC20.06■□□□□ 0.8
ATXN1P54253 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
ATXN1P54253 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
ATXN1P54253 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
ATXN1P54253 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
ATXN1P54253 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
ATXN1P54253 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
ATXN1P54253 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
ATXN1P54253 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
ATXN1P54253 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC20.05■□□□□ 0.8
ATXN1P54253 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC20.05■□□□□ 0.8
ATXN1P54253 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
ATXN1P54253 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
ATXN1P54253 KRT16P1-201ENST00000399124 1418 ntBASIC20.05■□□□□ 0.8
ATXN1P54253 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
ATXN1P54253 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
ATXN1P54253 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
ATXN1P54253 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
ATXN1P54253 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
ATXN1P54253 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC20.05■□□□□ 0.8
ATXN1P54253 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC20.05■□□□□ 0.8
ATXN1P54253 PPP1R14BP5-201ENST00000440334 435 ntBASIC20.05■□□□□ 0.8
ATXN1P54253 RBM17P1-201ENST00000453646 1190 ntBASIC20.05■□□□□ 0.8
ATXN1P54253 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
ATXN1P54253 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC20.05■□□□□ 0.8
ATXN1P54253 WWOX-216ENST00000569818 525 ntBASIC20.05■□□□□ 0.8
ATXN1P54253 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC20.05■□□□□ 0.8
ATXN1P54253 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC20.05■□□□□ 0.8
ATXN1P54253 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC20.05■□□□□ 0.8
ATXN1P54253 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
ATXN1P54253 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC20.05■□□□□ 0.8
ATXN1P54253 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
ATXN1P54253 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
ATXN1P54253 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC20.05■□□□□ 0.8
ATXN1P54253 KRT8P41-201ENST00000533985 1514 ntBASIC20.05■□□□□ 0.8
ATXN1P54253 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
ATXN1P54253 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
ATXN1P54253 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC20.05■□□□□ 0.8
ATXN1P54253 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
ATXN1P54253 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC20.05■□□□□ 0.8
ATXN1P54253 AC079598.2-202ENST00000546624 1451 ntBASIC20.05■□□□□ 0.8
ATXN1P54253 KRT18P22-201ENST00000402024 1347 ntBASIC20.04■□□□□ 0.8
ATXN1P54253 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC20.04■□□□□ 0.8
ATXN1P54253 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC20.04■□□□□ 0.8
ATXN1P54253 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
ATXN1P54253 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC20.04■□□□□ 0.8
ATXN1P54253 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
ATXN1P54253 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
ATXN1P54253 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
ATXN1P54253 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
ATXN1P54253 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
ATXN1P54253 KRT18P56-201ENST00000507275 550 ntBASIC20.04■□□□□ 0.8
ATXN1P54253 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC20.04■□□□□ 0.8
ATXN1P54253 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
ATXN1P54253 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC20.04■□□□□ 0.8
ATXN1P54253 DECR2-212ENST00000627716 352 ntTSL 2 BASIC20.04■□□□□ 0.8
ATXN1P54253 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC20.04■□□□□ 0.8
ATXN1P54253 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
ATXN1P54253 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
ATXN1P54253 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
ATXN1P54253 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
ATXN1P54253 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC20.04■□□□□ 0.8
ATXN1P54253 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC20.03■□□□□ 0.8
ATXN1P54253 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC20.03■□□□□ 0.8
ATXN1P54253 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC20.03■□□□□ 0.8
ATXN1P54253 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
ATXN1P54253 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
ATXN1P54253 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC20.03■□□□□ 0.8
ATXN1P54253 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
ATXN1P54253 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
ATXN1P54253 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
ATXN1P54253 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms