Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PDX1P52945 CD37-204ENST00000535669 1674 ntTSL 2 BASIC18.56■□□□□ 0.56
PDX1P52945 MOK-225ENST00000522867 1883 ntTSL 5 BASIC18.56■□□□□ 0.56
PDX1P52945 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC18.56■□□□□ 0.56
PDX1P52945 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC18.56■□□□□ 0.56
PDX1P52945 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
PDX1P52945 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC18.55■□□□□ 0.56
PDX1P52945 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
PDX1P52945 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
PDX1P52945 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
PDX1P52945 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
PDX1P52945 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
PDX1P52945 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
PDX1P52945 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
PDX1P52945 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
PDX1P52945 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
PDX1P52945 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC18.55■□□□□ 0.56
PDX1P52945 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC18.55■□□□□ 0.56
PDX1P52945 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
PDX1P52945 AL353719.1-201ENST00000566847 864 ntBASIC18.55■□□□□ 0.56
PDX1P52945 AL160286.2-201ENST00000567150 934 ntBASIC18.55■□□□□ 0.56
PDX1P52945 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC18.55■□□□□ 0.56
PDX1P52945 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC18.55■□□□□ 0.56
PDX1P52945 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
PDX1P52945 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
PDX1P52945 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
PDX1P52945 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
PDX1P52945 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC18.55■□□□□ 0.56
PDX1P52945 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC18.54■□□□□ 0.56
PDX1P52945 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
PDX1P52945 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
PDX1P52945 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
PDX1P52945 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
PDX1P52945 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC18.54■□□□□ 0.56
PDX1P52945 AC125437.2-201ENST00000625180 2167 ntBASIC18.54■□□□□ 0.56
PDX1P52945 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
PDX1P52945 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC18.54■□□□□ 0.56
PDX1P52945 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
PDX1P52945 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
PDX1P52945 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC18.54■□□□□ 0.56
PDX1P52945 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC18.54■□□□□ 0.56
PDX1P52945 TSPY17P-201ENST00000450329 467 ntBASIC18.54■□□□□ 0.56
PDX1P52945 GXYLT1P6-201ENST00000456472 1187 ntBASIC18.54■□□□□ 0.56
PDX1P52945 NME1-207ENST00000480143 964 ntTSL 2 BASIC18.54■□□□□ 0.56
PDX1P52945 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
PDX1P52945 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
PDX1P52945 AC011558.1-201ENST00000623459 338 ntBASIC18.54■□□□□ 0.56
PDX1P52945 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC18.54■□□□□ 0.56
PDX1P52945 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
PDX1P52945 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
PDX1P52945 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
PDX1P52945 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
PDX1P52945 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC18.54■□□□□ 0.56
PDX1P52945 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC18.54■□□□□ 0.56
PDX1P52945 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
PDX1P52945 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC18.54■□□□□ 0.56
PDX1P52945 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
PDX1P52945 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
PDX1P52945 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC18.53■□□□□ 0.56
PDX1P52945 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC18.53■□□□□ 0.56
PDX1P52945 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
PDX1P52945 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
PDX1P52945 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
PDX1P52945 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
PDX1P52945 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC18.53■□□□□ 0.56
PDX1P52945 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC18.53■□□□□ 0.56
PDX1P52945 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
PDX1P52945 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC18.53■□□□□ 0.56
PDX1P52945 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC18.53■□□□□ 0.56
PDX1P52945 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
PDX1P52945 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC18.53■□□□□ 0.56
PDX1P52945 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC18.53■□□□□ 0.56
PDX1P52945 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC18.53■□□□□ 0.56
PDX1P52945 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC18.53■□□□□ 0.56
PDX1P52945 METTL23-204ENST00000586752 904 ntTSL 2 BASIC18.53■□□□□ 0.56
PDX1P52945 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
PDX1P52945 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC18.53■□□□□ 0.56
PDX1P52945 AP001271.2-201ENST00000624018 1556 ntBASIC18.53■□□□□ 0.56
PDX1P52945 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC18.53■□□□□ 0.56
PDX1P52945 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
PDX1P52945 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
PDX1P52945 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
PDX1P52945 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
PDX1P52945 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
PDX1P52945 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
PDX1P52945 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
PDX1P52945 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
PDX1P52945 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC18.53■□□□□ 0.56
PDX1P52945 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
PDX1P52945 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
PDX1P52945 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC18.52■□□□□ 0.56
PDX1P52945 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
PDX1P52945 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
PDX1P52945 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
PDX1P52945 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
PDX1P52945 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
PDX1P52945 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
PDX1P52945 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC18.52■□□□□ 0.56
PDX1P52945 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
PDX1P52945 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC18.52■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms