Protein–RNA interactions for Protein: P51790

CLCN3, H(+)/Cl(-) exchange transporter 3, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3P51790 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CLCN3P51790 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CLCN3P51790 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
CLCN3P51790 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
CLCN3P51790 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CLCN3P51790 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CLCN3P51790 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
CLCN3P51790 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CLCN3P51790 AFG3L1P-217ENST00000557444 2447 ntBASIC21.03■□□□□ 0.96
CLCN3P51790 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CLCN3P51790 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CLCN3P51790 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC21.03■□□□□ 0.96
CLCN3P51790 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
CLCN3P51790 RNF146-204ENST00000476956 884 ntTSL 2 BASIC21.03■□□□□ 0.96
CLCN3P51790 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CLCN3P51790 AC063952.2-201ENST00000498792 1227 ntBASIC21.03■□□□□ 0.96
CLCN3P51790 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC21.03■□□□□ 0.96
CLCN3P51790 LTBR-211ENST00000543190 785 ntTSL 3 BASIC21.03■□□□□ 0.96
CLCN3P51790 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC21.03■□□□□ 0.96
CLCN3P51790 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
CLCN3P51790 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC21.03■□□□□ 0.96
CLCN3P51790 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC21.03■□□□□ 0.96
CLCN3P51790 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
CLCN3P51790 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC21.03■□□□□ 0.96
CLCN3P51790 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
CLCN3P51790 Z82202.1-201ENST00000623446 1880 ntBASIC21.03■□□□□ 0.96
CLCN3P51790 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CLCN3P51790 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
CLCN3P51790 BID-204ENST00000399767 2129 ntTSL 2 BASIC21.02■□□□□ 0.96
CLCN3P51790 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
CLCN3P51790 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC21.02■□□□□ 0.96
CLCN3P51790 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
CLCN3P51790 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC21.02■□□□□ 0.96
CLCN3P51790 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CLCN3P51790 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
CLCN3P51790 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CLCN3P51790 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CLCN3P51790 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC21.02■□□□□ 0.96
CLCN3P51790 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CLCN3P51790 RNF152P1-201ENST00000397754 604 ntBASIC21.02■□□□□ 0.96
CLCN3P51790 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC21.02■□□□□ 0.96
CLCN3P51790 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC21.02■□□□□ 0.96
CLCN3P51790 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC21.02■□□□□ 0.96
CLCN3P51790 AC087388.1-201ENST00000571370 1112 ntBASIC21.02■□□□□ 0.96
CLCN3P51790 AC011558.1-201ENST00000623459 338 ntBASIC21.02■□□□□ 0.96
CLCN3P51790 AL023973.1-201ENST00000624619 620 ntBASIC21.02■□□□□ 0.96
CLCN3P51790 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
CLCN3P51790 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CLCN3P51790 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
CLCN3P51790 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC21.02■□□□□ 0.95
CLCN3P51790 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
CLCN3P51790 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC21.01■□□□□ 0.95
CLCN3P51790 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CLCN3P51790 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC21.01■□□□□ 0.95
CLCN3P51790 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CLCN3P51790 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CLCN3P51790 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CLCN3P51790 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC21.01■□□□□ 0.95
CLCN3P51790 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC21.01■□□□□ 0.95
CLCN3P51790 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC21.01■□□□□ 0.95
CLCN3P51790 AL512604.3-201ENST00000569583 964 ntBASIC21.01■□□□□ 0.95
CLCN3P51790 AC008622.2-201ENST00000617006 1229 ntBASIC21.01■□□□□ 0.95
CLCN3P51790 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CLCN3P51790 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC21.01■□□□□ 0.95
CLCN3P51790 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CLCN3P51790 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CLCN3P51790 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
CLCN3P51790 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CLCN3P51790 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CLCN3P51790 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CLCN3P51790 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC21.01■□□□□ 0.95
CLCN3P51790 GAS2L1P1-201ENST00000420145 1480 ntBASIC21.01■□□□□ 0.95
CLCN3P51790 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
CLCN3P51790 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CLCN3P51790 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC21■□□□□ 0.95
CLCN3P51790 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CLCN3P51790 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CLCN3P51790 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CLCN3P51790 ANKRD20A18P-201ENST00000359341 492 ntBASIC21■□□□□ 0.95
CLCN3P51790 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC21■□□□□ 0.95
CLCN3P51790 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC21■□□□□ 0.95
CLCN3P51790 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC21■□□□□ 0.95
CLCN3P51790 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC21■□□□□ 0.95
CLCN3P51790 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC21■□□□□ 0.95
CLCN3P51790 TPM1-226ENST00000560959 925 ntTSL 2 BASIC21■□□□□ 0.95
CLCN3P51790 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC21■□□□□ 0.95
CLCN3P51790 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC21■□□□□ 0.95
CLCN3P51790 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC21■□□□□ 0.95
CLCN3P51790 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
CLCN3P51790 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC21■□□□□ 0.95
CLCN3P51790 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC20.99■□□□□ 0.95
CLCN3P51790 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
CLCN3P51790 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CLCN3P51790 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CLCN3P51790 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC20.99■□□□□ 0.95
CLCN3P51790 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC20.99■□□□□ 0.95
CLCN3P51790 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CLCN3P51790 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC20.99■□□□□ 0.95
CLCN3P51790 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC20.99■□□□□ 0.95
CLCN3P51790 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 49.4 ms