Protein–RNA interactions for Protein: P50416

CPT1A, Carnitine O-palmitoyltransferase 1, liver isoform, humanhuman

Predictions only

Length 773 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPT1AP50416 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CPT1AP50416 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CPT1AP50416 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CPT1AP50416 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
CPT1AP50416 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CPT1AP50416 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CPT1AP50416 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC21.19■□□□□ 0.98
CPT1AP50416 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CPT1AP50416 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CPT1AP50416 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
CPT1AP50416 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC21.19■□□□□ 0.98
CPT1AP50416 SPDYE13P-201ENST00000445314 798 ntBASIC21.19■□□□□ 0.98
CPT1AP50416 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC21.19■□□□□ 0.98
CPT1AP50416 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC21.19■□□□□ 0.98
CPT1AP50416 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CPT1AP50416 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CPT1AP50416 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
CPT1AP50416 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
CPT1AP50416 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CPT1AP50416 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
CPT1AP50416 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
CPT1AP50416 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CPT1AP50416 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
CPT1AP50416 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CPT1AP50416 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CPT1AP50416 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CPT1AP50416 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CPT1AP50416 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CPT1AP50416 AL645929.1-201ENST00000420084 975 ntBASIC21.18■□□□□ 0.98
CPT1AP50416 CNP-204ENST00000472031 1019 ntTSL 2 BASIC21.18■□□□□ 0.98
CPT1AP50416 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC21.18■□□□□ 0.98
CPT1AP50416 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC21.18■□□□□ 0.98
CPT1AP50416 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
CPT1AP50416 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CPT1AP50416 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
CPT1AP50416 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC21.18■□□□□ 0.98
CPT1AP50416 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CPT1AP50416 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CPT1AP50416 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC21.18■□□□□ 0.98
CPT1AP50416 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CPT1AP50416 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC21.17■□□□□ 0.98
CPT1AP50416 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CPT1AP50416 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
CPT1AP50416 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC21.17■□□□□ 0.98
CPT1AP50416 AL023284.2-201ENST00000405850 579 ntBASIC21.17■□□□□ 0.98
CPT1AP50416 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
CPT1AP50416 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC21.17■□□□□ 0.98
CPT1AP50416 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
CPT1AP50416 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC21.17■□□□□ 0.98
CPT1AP50416 AC024243.1-201ENST00000609234 778 ntBASIC21.17■□□□□ 0.98
CPT1AP50416 BCL10-202ENST00000620248 774 ntTSL 5 BASIC21.17■□□□□ 0.98
CPT1AP50416 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC21.17■□□□□ 0.98
CPT1AP50416 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CPT1AP50416 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC21.17■□□□□ 0.98
CPT1AP50416 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CPT1AP50416 AC036111.1-201ENST00000533973 1582 ntBASIC21.17■□□□□ 0.98
CPT1AP50416 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CPT1AP50416 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC21.17■□□□□ 0.98
CPT1AP50416 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC21.17■□□□□ 0.98
CPT1AP50416 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
CPT1AP50416 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CPT1AP50416 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
CPT1AP50416 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CPT1AP50416 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CPT1AP50416 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CPT1AP50416 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
CPT1AP50416 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
CPT1AP50416 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CPT1AP50416 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
CPT1AP50416 GAS2L1P1-201ENST00000420145 1480 ntBASIC21.16■□□□□ 0.98
CPT1AP50416 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC21.16■□□□□ 0.98
CPT1AP50416 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
CPT1AP50416 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
CPT1AP50416 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
CPT1AP50416 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
CPT1AP50416 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC21.16■□□□□ 0.98
CPT1AP50416 MCCD1P1-208ENST00000445732 328 ntBASIC21.16■□□□□ 0.98
CPT1AP50416 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CPT1AP50416 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
CPT1AP50416 MIR3180-5-201ENST00000583743 153 ntBASIC21.16■□□□□ 0.98
CPT1AP50416 WDR88-203ENST00000592765 651 ntTSL 5 BASIC21.16■□□□□ 0.98
CPT1AP50416 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC21.16■□□□□ 0.98
CPT1AP50416 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC21.16■□□□□ 0.98
CPT1AP50416 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CPT1AP50416 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
CPT1AP50416 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC21.16■□□□□ 0.98
CPT1AP50416 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC21.16■□□□□ 0.98
CPT1AP50416 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
CPT1AP50416 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CPT1AP50416 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC21.15■□□□□ 0.98
CPT1AP50416 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC21.15■□□□□ 0.98
CPT1AP50416 GOLGA6L5P-202ENST00000515341 1828 ntBASIC21.15■□□□□ 0.98
CPT1AP50416 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CPT1AP50416 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
CPT1AP50416 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC21.15■□□□□ 0.98
CPT1AP50416 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
CPT1AP50416 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CPT1AP50416 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CPT1AP50416 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CPT1AP50416 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 68.3 ms