Protein–RNA interactions for Protein: P48539

PCP4, Calmodulin regulator protein PCP4, humanhuman

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCP4P48539 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
PCP4P48539 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
PCP4P48539 AL139385.1-201ENST00000611744 3272 ntBASIC13.23□□□□□ -0.29
PCP4P48539 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
PCP4P48539 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC13.23□□□□□ -0.29
PCP4P48539 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
PCP4P48539 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
PCP4P48539 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
PCP4P48539 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC13.23□□□□□ -0.29
PCP4P48539 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
PCP4P48539 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
PCP4P48539 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
PCP4P48539 NUTM2E-201ENST00000429984 3292 ntAPPRIS P5 TSL 5 BASIC13.23□□□□□ -0.29
PCP4P48539 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
PCP4P48539 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC13.23□□□□□ -0.29
PCP4P48539 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC13.23□□□□□ -0.29
PCP4P48539 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC13.23□□□□□ -0.29
PCP4P48539 TMUB2-201ENST00000319511 2418 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
PCP4P48539 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
PCP4P48539 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
PCP4P48539 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC13.23□□□□□ -0.29
PCP4P48539 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
PCP4P48539 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC13.23□□□□□ -0.29
PCP4P48539 KIFC3-207ENST00000543930 3018 ntTSL 2 BASIC13.23□□□□□ -0.29
PCP4P48539 PPP1CB-203ENST00000395366 4893 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
PCP4P48539 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC13.23□□□□□ -0.29
PCP4P48539 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC13.23□□□□□ -0.29
PCP4P48539 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
PCP4P48539 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
PCP4P48539 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
PCP4P48539 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
PCP4P48539 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC13.22□□□□□ -0.29
PCP4P48539 AC107918.4-201ENST00000641966 3141 ntBASIC13.22□□□□□ -0.29
PCP4P48539 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
PCP4P48539 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
PCP4P48539 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
PCP4P48539 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
PCP4P48539 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC13.22□□□□□ -0.29
PCP4P48539 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC13.22□□□□□ -0.29
PCP4P48539 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
PCP4P48539 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
PCP4P48539 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC13.22□□□□□ -0.29
PCP4P48539 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC13.22□□□□□ -0.29
PCP4P48539 TMEM200A-204ENST00000617887 2899 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
PCP4P48539 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
PCP4P48539 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
PCP4P48539 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
PCP4P48539 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC13.22□□□□□ -0.29
PCP4P48539 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC13.22□□□□□ -0.29
PCP4P48539 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
PCP4P48539 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
PCP4P48539 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC13.22□□□□□ -0.29
PCP4P48539 EIF4G1-212ENST00000424196 5653 ntTSL 2 BASIC13.22□□□□□ -0.29
PCP4P48539 EFTUD1P1-204ENST00000560401 1798 ntBASIC13.22□□□□□ -0.29
PCP4P48539 AC027702.1-201ENST00000563810 1770 ntBASIC13.22□□□□□ -0.29
PCP4P48539 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC13.22□□□□□ -0.29
PCP4P48539 CDT1-201ENST00000301019 3240 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
PCP4P48539 ADAM15-203ENST00000356955 2949 ntAPPRIS P4 TSL 1 (best) BASIC13.22□□□□□ -0.29
PCP4P48539 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
PCP4P48539 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
PCP4P48539 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
PCP4P48539 FBXL19-201ENST00000338343 3965 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
PCP4P48539 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
PCP4P48539 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC13.21□□□□□ -0.29
PCP4P48539 RGMA-202ENST00000425933 3078 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
PCP4P48539 EDIL3-201ENST00000296591 4727 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
PCP4P48539 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
PCP4P48539 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC13.21□□□□□ -0.29
PCP4P48539 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.29
PCP4P48539 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
PCP4P48539 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
PCP4P48539 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC13.21□□□□□ -0.29
PCP4P48539 SYBU-204ENST00000408908 2983 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
PCP4P48539 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC13.21□□□□□ -0.29
PCP4P48539 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
PCP4P48539 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
PCP4P48539 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC13.21□□□□□ -0.29
PCP4P48539 DLX3-201ENST00000434704 2602 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
PCP4P48539 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
PCP4P48539 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC13.21□□□□□ -0.29
PCP4P48539 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
PCP4P48539 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
PCP4P48539 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
PCP4P48539 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
PCP4P48539 UBR5-212ENST00000521922 9008 ntAPPRIS ALT1 TSL 5 BASIC13.21□□□□□ -0.29
PCP4P48539 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC13.21□□□□□ -0.29
PCP4P48539 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
PCP4P48539 KYAT1-205ENST00000436267 2487 ntTSL 2 BASIC13.21□□□□□ -0.29
PCP4P48539 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC13.21□□□□□ -0.29
PCP4P48539 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
PCP4P48539 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
PCP4P48539 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC13.21□□□□□ -0.29
PCP4P48539 AC010247.2-201ENST00000559786 1955 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
PCP4P48539 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
PCP4P48539 LIMD2-201ENST00000259006 3193 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
PCP4P48539 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.3
PCP4P48539 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
PCP4P48539 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
PCP4P48539 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
PCP4P48539 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC13.21□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms