Protein–RNA interactions for Protein: P46736

BRCC3, Lys-63-specific deubiquitinase BRCC36, humanhuman

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3P46736 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC20.37■□□□□ 0.85
BRCC3P46736 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC20.37■□□□□ 0.85
BRCC3P46736 AL023973.1-201ENST00000624619 620 ntBASIC20.37■□□□□ 0.85
BRCC3P46736 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
BRCC3P46736 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC20.37■□□□□ 0.85
BRCC3P46736 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
BRCC3P46736 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
BRCC3P46736 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
BRCC3P46736 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
BRCC3P46736 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
BRCC3P46736 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC20.36■□□□□ 0.85
BRCC3P46736 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC20.36■□□□□ 0.85
BRCC3P46736 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
BRCC3P46736 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC20.36■□□□□ 0.85
BRCC3P46736 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC20.36■□□□□ 0.85
BRCC3P46736 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC20.36■□□□□ 0.85
BRCC3P46736 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC20.36■□□□□ 0.85
BRCC3P46736 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
BRCC3P46736 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC20.36■□□□□ 0.85
BRCC3P46736 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
BRCC3P46736 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
BRCC3P46736 TSPY5P-201ENST00000426936 936 ntBASIC20.36■□□□□ 0.85
BRCC3P46736 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC20.36■□□□□ 0.85
BRCC3P46736 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC20.36■□□□□ 0.85
BRCC3P46736 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC20.36■□□□□ 0.85
BRCC3P46736 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC20.36■□□□□ 0.85
BRCC3P46736 AC008622.2-201ENST00000617006 1229 ntBASIC20.36■□□□□ 0.85
BRCC3P46736 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC20.36■□□□□ 0.85
BRCC3P46736 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
BRCC3P46736 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
BRCC3P46736 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC20.36■□□□□ 0.85
BRCC3P46736 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
BRCC3P46736 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
BRCC3P46736 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC20.36■□□□□ 0.85
BRCC3P46736 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
BRCC3P46736 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC20.35■□□□□ 0.85
BRCC3P46736 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC20.35■□□□□ 0.85
BRCC3P46736 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
BRCC3P46736 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
BRCC3P46736 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
BRCC3P46736 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC20.35■□□□□ 0.85
BRCC3P46736 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
BRCC3P46736 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
BRCC3P46736 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
BRCC3P46736 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC20.35■□□□□ 0.85
BRCC3P46736 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC20.35■□□□□ 0.85
BRCC3P46736 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC20.35■□□□□ 0.85
BRCC3P46736 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC20.35■□□□□ 0.85
BRCC3P46736 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC20.35■□□□□ 0.85
BRCC3P46736 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
BRCC3P46736 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
BRCC3P46736 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC20.35■□□□□ 0.85
BRCC3P46736 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
BRCC3P46736 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
BRCC3P46736 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
BRCC3P46736 AL158211.5-201ENST00000623583 2518 ntBASIC20.34■□□□□ 0.85
BRCC3P46736 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
BRCC3P46736 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
BRCC3P46736 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
BRCC3P46736 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC20.34■□□□□ 0.85
BRCC3P46736 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
BRCC3P46736 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC20.34■□□□□ 0.85
BRCC3P46736 ANKRD20A18P-201ENST00000359341 492 ntBASIC20.34■□□□□ 0.85
BRCC3P46736 Telomerase-vert.1-201ENST00000363312 438 ntBASIC20.34■□□□□ 0.85
BRCC3P46736 AL441883.1-201ENST00000566170 1045 ntBASIC20.34■□□□□ 0.85
BRCC3P46736 AL512604.3-201ENST00000569583 964 ntBASIC20.34■□□□□ 0.85
BRCC3P46736 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC20.34■□□□□ 0.85
BRCC3P46736 GAS2L1P1-201ENST00000420145 1480 ntBASIC20.34■□□□□ 0.85
BRCC3P46736 Z82202.1-201ENST00000623446 1880 ntBASIC20.34■□□□□ 0.85
BRCC3P46736 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
BRCC3P46736 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC20.34■□□□□ 0.85
BRCC3P46736 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
BRCC3P46736 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
BRCC3P46736 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC20.34■□□□□ 0.85
BRCC3P46736 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC20.34■□□□□ 0.85
BRCC3P46736 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
BRCC3P46736 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
BRCC3P46736 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC20.33■□□□□ 0.85
BRCC3P46736 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
BRCC3P46736 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
BRCC3P46736 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC20.33■□□□□ 0.85
BRCC3P46736 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC20.33■□□□□ 0.85
BRCC3P46736 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
BRCC3P46736 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC20.33■□□□□ 0.85
BRCC3P46736 FAM8A6P-201ENST00000407496 1135 ntBASIC20.33■□□□□ 0.85
BRCC3P46736 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
BRCC3P46736 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC20.33■□□□□ 0.85
BRCC3P46736 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
BRCC3P46736 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC20.33■□□□□ 0.85
BRCC3P46736 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC20.33■□□□□ 0.85
BRCC3P46736 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC20.33■□□□□ 0.85
BRCC3P46736 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
BRCC3P46736 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.85
BRCC3P46736 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC20.33■□□□□ 0.84
BRCC3P46736 BID-204ENST00000399767 2129 ntTSL 2 BASIC20.33■□□□□ 0.84
BRCC3P46736 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
BRCC3P46736 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
BRCC3P46736 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.84
BRCC3P46736 AFG3L1P-217ENST00000557444 2447 ntBASIC20.33■□□□□ 0.84
BRCC3P46736 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 15.8 ms