Protein–RNA interactions for Protein: P41273

TNFSF9, Tumor necrosis factor ligand superfamily member 9, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF9P41273 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
TNFSF9P41273 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
TNFSF9P41273 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
TNFSF9P41273 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC20.71■□□□□ 0.91
TNFSF9P41273 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC20.71■□□□□ 0.91
TNFSF9P41273 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
TNFSF9P41273 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC20.71■□□□□ 0.91
TNFSF9P41273 AC141586.3-201ENST00000562166 1838 ntBASIC20.71■□□□□ 0.91
TNFSF9P41273 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
TNFSF9P41273 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
TNFSF9P41273 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
TNFSF9P41273 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC20.7■□□□□ 0.91
TNFSF9P41273 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
TNFSF9P41273 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC20.7■□□□□ 0.9
TNFSF9P41273 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
TNFSF9P41273 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
TNFSF9P41273 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC20.7■□□□□ 0.9
TNFSF9P41273 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
TNFSF9P41273 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
TNFSF9P41273 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC20.7■□□□□ 0.9
TNFSF9P41273 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
TNFSF9P41273 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
TNFSF9P41273 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
TNFSF9P41273 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
TNFSF9P41273 TMA16-209ENST00000513272 803 ntTSL 2 BASIC20.7■□□□□ 0.9
TNFSF9P41273 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC20.7■□□□□ 0.9
TNFSF9P41273 EGLN1P1-201ENST00000531623 762 ntBASIC20.7■□□□□ 0.9
TNFSF9P41273 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC20.7■□□□□ 0.9
TNFSF9P41273 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
TNFSF9P41273 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
TNFSF9P41273 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC20.7■□□□□ 0.9
TNFSF9P41273 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC20.7■□□□□ 0.9
TNFSF9P41273 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
TNFSF9P41273 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC20.7■□□□□ 0.9
TNFSF9P41273 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
TNFSF9P41273 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC20.69■□□□□ 0.9
TNFSF9P41273 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
TNFSF9P41273 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
TNFSF9P41273 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC20.69■□□□□ 0.9
TNFSF9P41273 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
TNFSF9P41273 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
TNFSF9P41273 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
TNFSF9P41273 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC20.69■□□□□ 0.9
TNFSF9P41273 AL023803.3-201ENST00000615559 522 ntBASIC20.69■□□□□ 0.9
TNFSF9P41273 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
TNFSF9P41273 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC20.69■□□□□ 0.9
TNFSF9P41273 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC20.69■□□□□ 0.9
TNFSF9P41273 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
TNFSF9P41273 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC20.69■□□□□ 0.9
TNFSF9P41273 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
TNFSF9P41273 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC20.68■□□□□ 0.9
TNFSF9P41273 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC20.68■□□□□ 0.9
TNFSF9P41273 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC20.68■□□□□ 0.9
TNFSF9P41273 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC20.68■□□□□ 0.9
TNFSF9P41273 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC20.68■□□□□ 0.9
TNFSF9P41273 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC20.68■□□□□ 0.9
TNFSF9P41273 IRX1P1-201ENST00000438849 1838 ntBASIC20.68■□□□□ 0.9
TNFSF9P41273 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC20.68■□□□□ 0.9
TNFSF9P41273 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
TNFSF9P41273 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC20.68■□□□□ 0.9
TNFSF9P41273 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC20.68■□□□□ 0.9
TNFSF9P41273 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
TNFSF9P41273 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
TNFSF9P41273 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
TNFSF9P41273 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
TNFSF9P41273 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
TNFSF9P41273 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
TNFSF9P41273 TBC1D3P2-202ENST00000577902 1649 ntBASIC20.67■□□□□ 0.9
TNFSF9P41273 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
TNFSF9P41273 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
TNFSF9P41273 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
TNFSF9P41273 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
TNFSF9P41273 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
TNFSF9P41273 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
TNFSF9P41273 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
TNFSF9P41273 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
TNFSF9P41273 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
TNFSF9P41273 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
TNFSF9P41273 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
TNFSF9P41273 SLC25A1P2-201ENST00000430693 912 ntBASIC20.67■□□□□ 0.9
TNFSF9P41273 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC20.67■□□□□ 0.9
TNFSF9P41273 FAM87A-204ENST00000613235 858 ntBASIC20.67■□□□□ 0.9
TNFSF9P41273 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
TNFSF9P41273 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC20.67■□□□□ 0.9
TNFSF9P41273 KRT18P22-201ENST00000402024 1347 ntBASIC20.67■□□□□ 0.9
TNFSF9P41273 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC20.67■□□□□ 0.9
TNFSF9P41273 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC20.67■□□□□ 0.9
TNFSF9P41273 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
TNFSF9P41273 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC20.67■□□□□ 0.9
TNFSF9P41273 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC20.67■□□□□ 0.9
TNFSF9P41273 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
TNFSF9P41273 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC20.66■□□□□ 0.9
TNFSF9P41273 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC20.66■□□□□ 0.9
TNFSF9P41273 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC20.66■□□□□ 0.9
TNFSF9P41273 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
TNFSF9P41273 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
TNFSF9P41273 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
TNFSF9P41273 AC007663.1-201ENST00000438948 1240 ntBASIC20.66■□□□□ 0.9
TNFSF9P41273 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC20.66■□□□□ 0.9
TNFSF9P41273 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC20.66■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms