Protein–RNA interactions for Protein: P40939

HADHA, Trifunctional enzyme subunit alpha, mitochondrial, humanhuman

Predictions only

Length 763 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HADHAP40939 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC19.33■□□□□ 0.69
HADHAP40939 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC19.33■□□□□ 0.69
HADHAP40939 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC19.33■□□□□ 0.69
HADHAP40939 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC19.33■□□□□ 0.69
HADHAP40939 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
HADHAP40939 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
HADHAP40939 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
HADHAP40939 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC19.33■□□□□ 0.69
HADHAP40939 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC19.33■□□□□ 0.69
HADHAP40939 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
HADHAP40939 PRORSD1P-201ENST00000295112 541 ntBASIC19.33■□□□□ 0.68
HADHAP40939 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC19.33■□□□□ 0.68
HADHAP40939 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC19.33■□□□□ 0.68
HADHAP40939 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC19.33■□□□□ 0.68
HADHAP40939 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC19.33■□□□□ 0.68
HADHAP40939 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC19.33■□□□□ 0.68
HADHAP40939 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC19.33■□□□□ 0.68
HADHAP40939 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
HADHAP40939 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
HADHAP40939 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
HADHAP40939 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
HADHAP40939 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC19.33■□□□□ 0.68
HADHAP40939 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC19.33■□□□□ 0.68
HADHAP40939 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC19.33■□□□□ 0.68
HADHAP40939 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
HADHAP40939 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
HADHAP40939 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
HADHAP40939 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
HADHAP40939 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
HADHAP40939 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
HADHAP40939 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC19.32■□□□□ 0.68
HADHAP40939 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
HADHAP40939 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC19.32■□□□□ 0.68
HADHAP40939 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
HADHAP40939 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC19.32■□□□□ 0.68
HADHAP40939 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
HADHAP40939 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC19.32■□□□□ 0.68
HADHAP40939 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
HADHAP40939 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
HADHAP40939 AL353807.1-201ENST00000427475 662 ntBASIC19.32■□□□□ 0.68
HADHAP40939 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC19.32■□□□□ 0.68
HADHAP40939 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
HADHAP40939 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC19.32■□□□□ 0.68
HADHAP40939 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC19.32■□□□□ 0.68
HADHAP40939 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC19.32■□□□□ 0.68
HADHAP40939 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC19.32■□□□□ 0.68
HADHAP40939 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC19.32■□□□□ 0.68
HADHAP40939 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
HADHAP40939 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
HADHAP40939 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC19.32■□□□□ 0.68
HADHAP40939 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
HADHAP40939 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC19.32■□□□□ 0.68
HADHAP40939 AL161938.1-201ENST00000569833 2180 ntBASIC19.32■□□□□ 0.68
HADHAP40939 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
HADHAP40939 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC19.32■□□□□ 0.68
HADHAP40939 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
HADHAP40939 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC19.31■□□□□ 0.68
HADHAP40939 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC19.31■□□□□ 0.68
HADHAP40939 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
HADHAP40939 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
HADHAP40939 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
HADHAP40939 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
HADHAP40939 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
HADHAP40939 TEX21P-204ENST00000641479 1693 ntBASIC19.31■□□□□ 0.68
HADHAP40939 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
HADHAP40939 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
HADHAP40939 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC19.31■□□□□ 0.68
HADHAP40939 AC142381.4-202ENST00000563973 229 ntBASIC19.31■□□□□ 0.68
HADHAP40939 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC19.31■□□□□ 0.68
HADHAP40939 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC19.31■□□□□ 0.68
HADHAP40939 HLA-A-209ENST00000638375 975 ntBASIC19.31■□□□□ 0.68
HADHAP40939 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
HADHAP40939 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC19.31■□□□□ 0.68
HADHAP40939 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
HADHAP40939 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
HADHAP40939 AC120498.9-201ENST00000339021 3867 ntBASIC19.31■□□□□ 0.68
HADHAP40939 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
HADHAP40939 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
HADHAP40939 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
HADHAP40939 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
HADHAP40939 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
HADHAP40939 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC19.3■□□□□ 0.68
HADHAP40939 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC19.3■□□□□ 0.68
HADHAP40939 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC19.3■□□□□ 0.68
HADHAP40939 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
HADHAP40939 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
HADHAP40939 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC19.3■□□□□ 0.68
HADHAP40939 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
HADHAP40939 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
HADHAP40939 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC19.3■□□□□ 0.68
HADHAP40939 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
HADHAP40939 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
HADHAP40939 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
HADHAP40939 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC19.3■□□□□ 0.68
HADHAP40939 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC19.3■□□□□ 0.68
HADHAP40939 AL353708.3-201ENST00000610272 989 ntBASIC19.3■□□□□ 0.68
HADHAP40939 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
HADHAP40939 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
HADHAP40939 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
HADHAP40939 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC19.3■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms