Protein–RNA interactions for Protein: P36406

TRIM23, E3 ubiquitin-protein ligase TRIM23, humanhuman

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM23P36406 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC18.83■□□□□ 0.6
TRIM23P36406 BX664615.1-201ENST00000443558 458 ntBASIC18.83■□□□□ 0.6
TRIM23P36406 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
TRIM23P36406 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC18.83■□□□□ 0.6
TRIM23P36406 AL512604.3-201ENST00000569583 964 ntBASIC18.83■□□□□ 0.6
TRIM23P36406 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC18.83■□□□□ 0.6
TRIM23P36406 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC18.83■□□□□ 0.6
TRIM23P36406 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC18.83■□□□□ 0.6
TRIM23P36406 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC18.83■□□□□ 0.6
TRIM23P36406 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
TRIM23P36406 AL158211.5-201ENST00000623583 2518 ntBASIC18.83■□□□□ 0.6
TRIM23P36406 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC18.83■□□□□ 0.6
TRIM23P36406 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
TRIM23P36406 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
TRIM23P36406 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
TRIM23P36406 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
TRIM23P36406 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
TRIM23P36406 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
TRIM23P36406 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
TRIM23P36406 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
TRIM23P36406 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC18.83■□□□□ 0.6
TRIM23P36406 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
TRIM23P36406 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC18.83■□□□□ 0.6
TRIM23P36406 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC18.82■□□□□ 0.6
TRIM23P36406 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
TRIM23P36406 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
TRIM23P36406 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TRIM23P36406 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
TRIM23P36406 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TRIM23P36406 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC18.82■□□□□ 0.6
TRIM23P36406 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC18.82■□□□□ 0.6
TRIM23P36406 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC18.82■□□□□ 0.6
TRIM23P36406 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC18.82■□□□□ 0.6
TRIM23P36406 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC18.82■□□□□ 0.6
TRIM23P36406 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC18.82■□□□□ 0.6
TRIM23P36406 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC18.82■□□□□ 0.6
TRIM23P36406 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
TRIM23P36406 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
TRIM23P36406 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
TRIM23P36406 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
TRIM23P36406 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TRIM23P36406 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TRIM23P36406 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC18.82■□□□□ 0.6
TRIM23P36406 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
TRIM23P36406 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC18.81■□□□□ 0.6
TRIM23P36406 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
TRIM23P36406 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TRIM23P36406 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
TRIM23P36406 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TRIM23P36406 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
TRIM23P36406 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC18.81■□□□□ 0.6
TRIM23P36406 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
TRIM23P36406 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
TRIM23P36406 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
TRIM23P36406 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
TRIM23P36406 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
TRIM23P36406 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
TRIM23P36406 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC18.81■□□□□ 0.6
TRIM23P36406 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
TRIM23P36406 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC18.81■□□□□ 0.6
TRIM23P36406 TEX21P-204ENST00000641479 1693 ntBASIC18.81■□□□□ 0.6
TRIM23P36406 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC18.81■□□□□ 0.6
TRIM23P36406 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC18.81■□□□□ 0.6
TRIM23P36406 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC18.81■□□□□ 0.6
TRIM23P36406 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC18.81■□□□□ 0.6
TRIM23P36406 AFG3L1P-217ENST00000557444 2447 ntBASIC18.81■□□□□ 0.6
TRIM23P36406 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC18.81■□□□□ 0.6
TRIM23P36406 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
TRIM23P36406 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
TRIM23P36406 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC18.8■□□□□ 0.6
TRIM23P36406 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TRIM23P36406 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC18.8■□□□□ 0.6
TRIM23P36406 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TRIM23P36406 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TRIM23P36406 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
TRIM23P36406 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TRIM23P36406 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC18.8■□□□□ 0.6
TRIM23P36406 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
TRIM23P36406 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
TRIM23P36406 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TRIM23P36406 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
TRIM23P36406 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
TRIM23P36406 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC18.8■□□□□ 0.6
TRIM23P36406 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC18.8■□□□□ 0.6
TRIM23P36406 PHB2-202ENST00000440277 996 ntTSL 5 BASIC18.8■□□□□ 0.6
TRIM23P36406 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
TRIM23P36406 AL049597.2-201ENST00000565575 961 ntBASIC18.8■□□□□ 0.6
TRIM23P36406 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC18.8■□□□□ 0.6
TRIM23P36406 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC18.8■□□□□ 0.6
TRIM23P36406 AC006011.2-201ENST00000621313 1158 ntBASIC18.8■□□□□ 0.6
TRIM23P36406 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
TRIM23P36406 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC18.8■□□□□ 0.6
TRIM23P36406 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC18.8■□□□□ 0.6
TRIM23P36406 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC18.8■□□□□ 0.6
TRIM23P36406 TBC1D3P2-202ENST00000577902 1649 ntBASIC18.8■□□□□ 0.6
TRIM23P36406 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC18.8■□□□□ 0.6
TRIM23P36406 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
TRIM23P36406 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC18.8■□□□□ 0.6
TRIM23P36406 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
TRIM23P36406 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms