Protein–RNA interactions for Protein: P33897

ABCD1, ATP-binding cassette sub-family D member 1, humanhuman

Predictions only

Length 745 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD1P33897 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
ABCD1P33897 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
ABCD1P33897 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
ABCD1P33897 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC20.92■□□□□ 0.94
ABCD1P33897 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
ABCD1P33897 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
ABCD1P33897 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
ABCD1P33897 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
ABCD1P33897 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
ABCD1P33897 MMP23A-201ENST00000234610 1017 ntBASIC20.91■□□□□ 0.94
ABCD1P33897 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
ABCD1P33897 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
ABCD1P33897 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
ABCD1P33897 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
ABCD1P33897 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
ABCD1P33897 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC20.91■□□□□ 0.94
ABCD1P33897 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
ABCD1P33897 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
ABCD1P33897 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC20.91■□□□□ 0.94
ABCD1P33897 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
ABCD1P33897 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
ABCD1P33897 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
ABCD1P33897 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
ABCD1P33897 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC20.91■□□□□ 0.94
ABCD1P33897 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
ABCD1P33897 AP000525.1-201ENST00000608286 694 ntBASIC20.91■□□□□ 0.94
ABCD1P33897 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC20.91■□□□□ 0.94
ABCD1P33897 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC20.91■□□□□ 0.94
ABCD1P33897 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC20.91■□□□□ 0.94
ABCD1P33897 AC116562.4-201ENST00000641316 2276 ntBASIC20.91■□□□□ 0.94
ABCD1P33897 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
ABCD1P33897 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
ABCD1P33897 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC20.9■□□□□ 0.94
ABCD1P33897 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
ABCD1P33897 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
ABCD1P33897 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
ABCD1P33897 IRX1P1-201ENST00000438849 1838 ntBASIC20.9■□□□□ 0.94
ABCD1P33897 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
ABCD1P33897 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC20.9■□□□□ 0.94
ABCD1P33897 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
ABCD1P33897 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC20.9■□□□□ 0.94
ABCD1P33897 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
ABCD1P33897 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC20.9■□□□□ 0.94
ABCD1P33897 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
ABCD1P33897 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC20.9■□□□□ 0.94
ABCD1P33897 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC20.9■□□□□ 0.94
ABCD1P33897 BX088651.1-201ENST00000540551 451 ntBASIC20.9■□□□□ 0.94
ABCD1P33897 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC20.9■□□□□ 0.94
ABCD1P33897 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC20.9■□□□□ 0.94
ABCD1P33897 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
ABCD1P33897 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC20.9■□□□□ 0.94
ABCD1P33897 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC20.9■□□□□ 0.94
ABCD1P33897 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC20.9■□□□□ 0.94
ABCD1P33897 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC20.9■□□□□ 0.94
ABCD1P33897 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC20.89■□□□□ 0.94
ABCD1P33897 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
ABCD1P33897 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC20.89■□□□□ 0.94
ABCD1P33897 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC20.89■□□□□ 0.94
ABCD1P33897 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
ABCD1P33897 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC20.89■□□□□ 0.94
ABCD1P33897 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
ABCD1P33897 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC20.89■□□□□ 0.93
ABCD1P33897 AC007952.6-201ENST00000573168 2673 ntBASIC20.89■□□□□ 0.93
ABCD1P33897 AC003957.1-201ENST00000625108 2673 ntBASIC20.89■□□□□ 0.93
ABCD1P33897 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
ABCD1P33897 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC20.89■□□□□ 0.93
ABCD1P33897 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC20.89■□□□□ 0.93
ABCD1P33897 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
ABCD1P33897 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC20.89■□□□□ 0.93
ABCD1P33897 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
ABCD1P33897 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
ABCD1P33897 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
ABCD1P33897 MIR1238-201ENST00000408483 83 ntBASIC20.89■□□□□ 0.93
ABCD1P33897 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC20.89■□□□□ 0.93
ABCD1P33897 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC20.89■□□□□ 0.93
ABCD1P33897 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
ABCD1P33897 CCR12P-201ENST00000446203 998 ntBASIC20.89■□□□□ 0.93
ABCD1P33897 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC20.89■□□□□ 0.93
ABCD1P33897 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC20.89■□□□□ 0.93
ABCD1P33897 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC20.89■□□□□ 0.93
ABCD1P33897 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
ABCD1P33897 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
ABCD1P33897 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
ABCD1P33897 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
ABCD1P33897 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC20.88■□□□□ 0.93
ABCD1P33897 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
ABCD1P33897 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
ABCD1P33897 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
ABCD1P33897 KRT8P3-201ENST00000519669 1449 ntBASIC20.88■□□□□ 0.93
ABCD1P33897 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
ABCD1P33897 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
ABCD1P33897 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC20.88■□□□□ 0.93
ABCD1P33897 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
ABCD1P33897 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
ABCD1P33897 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
ABCD1P33897 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
ABCD1P33897 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
ABCD1P33897 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC20.88■□□□□ 0.93
ABCD1P33897 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
ABCD1P33897 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC20.88■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 44.4 ms