Protein–RNA interactions for Protein: P22223

CDH3, Cadherin-3, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3P22223 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CDH3P22223 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CDH3P22223 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
CDH3P22223 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CDH3P22223 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CDH3P22223 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CDH3P22223 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC18.7■□□□□ 0.58
CDH3P22223 AC004980.1-204ENST00000429707 299 ntBASIC18.7■□□□□ 0.58
CDH3P22223 RBM17P1-201ENST00000453646 1190 ntBASIC18.7■□□□□ 0.58
CDH3P22223 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CDH3P22223 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CDH3P22223 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC18.7■□□□□ 0.58
CDH3P22223 NME1-207ENST00000480143 964 ntTSL 2 BASIC18.7■□□□□ 0.58
CDH3P22223 AC026271.3-201ENST00000571884 352 ntBASIC18.7■□□□□ 0.58
CDH3P22223 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC18.7■□□□□ 0.58
CDH3P22223 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC18.7■□□□□ 0.58
CDH3P22223 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC18.7■□□□□ 0.58
CDH3P22223 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
CDH3P22223 ABBA01031674.1-201ENST00000635145 728 ntBASIC18.7■□□□□ 0.58
CDH3P22223 AL158211.5-201ENST00000623583 2518 ntBASIC18.7■□□□□ 0.58
CDH3P22223 AP000974.1-201ENST00000623909 2387 ntBASIC18.7■□□□□ 0.58
CDH3P22223 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
CDH3P22223 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CDH3P22223 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CDH3P22223 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CDH3P22223 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CDH3P22223 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC18.69■□□□□ 0.58
CDH3P22223 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC18.69■□□□□ 0.58
CDH3P22223 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC18.69■□□□□ 0.58
CDH3P22223 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
CDH3P22223 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CDH3P22223 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CDH3P22223 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
CDH3P22223 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CDH3P22223 AC116562.2-201ENST00000507042 360 ntBASIC18.69■□□□□ 0.58
CDH3P22223 RPS20-210ENST00000523936 899 ntTSL 2 BASIC18.69■□□□□ 0.58
CDH3P22223 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CDH3P22223 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC18.69■□□□□ 0.58
CDH3P22223 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC18.69■□□□□ 0.58
CDH3P22223 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CDH3P22223 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CDH3P22223 FSCN1P1-201ENST00000568912 1481 ntBASIC18.69■□□□□ 0.58
CDH3P22223 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CDH3P22223 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CDH3P22223 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CDH3P22223 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
CDH3P22223 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CDH3P22223 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
CDH3P22223 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CDH3P22223 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
CDH3P22223 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
CDH3P22223 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CDH3P22223 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CDH3P22223 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC18.68■□□□□ 0.58
CDH3P22223 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
CDH3P22223 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
CDH3P22223 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
CDH3P22223 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
CDH3P22223 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC18.68■□□□□ 0.58
CDH3P22223 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC18.68■□□□□ 0.58
CDH3P22223 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC18.68■□□□□ 0.58
CDH3P22223 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CDH3P22223 MIR6786-201ENST00000616843 113 ntBASIC18.68■□□□□ 0.58
CDH3P22223 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC18.68■□□□□ 0.58
CDH3P22223 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CDH3P22223 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CDH3P22223 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
CDH3P22223 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
CDH3P22223 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
CDH3P22223 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC18.68■□□□□ 0.58
CDH3P22223 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC18.68■□□□□ 0.58
CDH3P22223 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CDH3P22223 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CDH3P22223 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CDH3P22223 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CDH3P22223 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CDH3P22223 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
CDH3P22223 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC18.67■□□□□ 0.58
CDH3P22223 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CDH3P22223 MMP23A-201ENST00000234610 1017 ntBASIC18.67■□□□□ 0.58
CDH3P22223 AC087499.1-201ENST00000418141 1075 ntBASIC18.67■□□□□ 0.58
CDH3P22223 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
CDH3P22223 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC18.67■□□□□ 0.58
CDH3P22223 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC18.67■□□□□ 0.58
CDH3P22223 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC18.67■□□□□ 0.58
CDH3P22223 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC18.67■□□□□ 0.58
CDH3P22223 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC18.67■□□□□ 0.58
CDH3P22223 AP000525.1-201ENST00000608286 694 ntBASIC18.67■□□□□ 0.58
CDH3P22223 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
CDH3P22223 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
CDH3P22223 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
CDH3P22223 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
CDH3P22223 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CDH3P22223 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
CDH3P22223 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CDH3P22223 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CDH3P22223 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CDH3P22223 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC18.67■□□□□ 0.58
CDH3P22223 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CDH3P22223 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC18.67■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms