Protein–RNA interactions for Protein: P18846

ATF1, Cyclic AMP-dependent transcription factor ATF-1, humanhuman

Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF1P18846 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
ATF1P18846 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
ATF1P18846 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
ATF1P18846 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC16.79■□□□□ 0.28
ATF1P18846 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
ATF1P18846 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
ATF1P18846 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC16.79■□□□□ 0.28
ATF1P18846 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
ATF1P18846 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
ATF1P18846 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
ATF1P18846 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
ATF1P18846 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
ATF1P18846 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
ATF1P18846 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
ATF1P18846 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
ATF1P18846 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
ATF1P18846 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC16.78■□□□□ 0.28
ATF1P18846 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
ATF1P18846 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
ATF1P18846 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC16.78■□□□□ 0.28
ATF1P18846 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
ATF1P18846 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC16.78■□□□□ 0.28
ATF1P18846 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC16.78■□□□□ 0.28
ATF1P18846 CROCCP5-201ENST00000436658 830 ntBASIC16.78■□□□□ 0.28
ATF1P18846 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC16.78■□□□□ 0.28
ATF1P18846 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC16.78■□□□□ 0.28
ATF1P18846 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC16.78■□□□□ 0.28
ATF1P18846 RAP2CP1-201ENST00000605103 478 ntBASIC16.78■□□□□ 0.28
ATF1P18846 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC16.78■□□□□ 0.28
ATF1P18846 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC16.78■□□□□ 0.28
ATF1P18846 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
ATF1P18846 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
ATF1P18846 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
ATF1P18846 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
ATF1P18846 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
ATF1P18846 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
ATF1P18846 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC16.78■□□□□ 0.28
ATF1P18846 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC16.78■□□□□ 0.28
ATF1P18846 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
ATF1P18846 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC16.78■□□□□ 0.28
ATF1P18846 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC16.77■□□□□ 0.28
ATF1P18846 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
ATF1P18846 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
ATF1P18846 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.28
ATF1P18846 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC16.77■□□□□ 0.28
ATF1P18846 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
ATF1P18846 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.28
ATF1P18846 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC16.77■□□□□ 0.28
ATF1P18846 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
ATF1P18846 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
ATF1P18846 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
ATF1P18846 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
ATF1P18846 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
ATF1P18846 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC16.77■□□□□ 0.28
ATF1P18846 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC16.77■□□□□ 0.28
ATF1P18846 DUSP5P2-201ENST00000426873 1033 ntBASIC16.77■□□□□ 0.28
ATF1P18846 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
ATF1P18846 DLX3-202ENST00000512495 834 ntTSL 2 BASIC16.77■□□□□ 0.28
ATF1P18846 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC16.77■□□□□ 0.28
ATF1P18846 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC16.77■□□□□ 0.28
ATF1P18846 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
ATF1P18846 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC16.77■□□□□ 0.28
ATF1P18846 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC16.77■□□□□ 0.28
ATF1P18846 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC16.77■□□□□ 0.28
ATF1P18846 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC16.77■□□□□ 0.28
ATF1P18846 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC16.77■□□□□ 0.28
ATF1P18846 AL121832.2-201ENST00000610979 668 ntBASIC16.77■□□□□ 0.28
ATF1P18846 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC16.77■□□□□ 0.28
ATF1P18846 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC16.77■□□□□ 0.27
ATF1P18846 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
ATF1P18846 FZD10-202ENST00000539839 3282 ntBASIC16.77■□□□□ 0.27
ATF1P18846 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC16.77■□□□□ 0.27
ATF1P18846 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
ATF1P18846 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC16.77■□□□□ 0.27
ATF1P18846 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
ATF1P18846 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
ATF1P18846 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
ATF1P18846 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC16.77■□□□□ 0.27
ATF1P18846 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC16.77■□□□□ 0.27
ATF1P18846 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
ATF1P18846 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
ATF1P18846 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC16.76■□□□□ 0.27
ATF1P18846 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
ATF1P18846 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
ATF1P18846 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
ATF1P18846 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC16.76■□□□□ 0.27
ATF1P18846 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
ATF1P18846 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
ATF1P18846 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
ATF1P18846 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
ATF1P18846 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC16.76■□□□□ 0.27
ATF1P18846 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
ATF1P18846 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC16.76■□□□□ 0.27
ATF1P18846 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
ATF1P18846 AC083906.2-201ENST00000511578 360 ntBASIC16.76■□□□□ 0.27
ATF1P18846 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
ATF1P18846 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
ATF1P18846 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
ATF1P18846 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
ATF1P18846 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 19 ms