Protein–RNA interactions for Protein: P18206

VCL, Vinculin, humanhuman

Predictions only

Length 1,134 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCLP18206 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
VCLP18206 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC19.21■□□□□ 0.67
VCLP18206 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC19.21■□□□□ 0.67
VCLP18206 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
VCLP18206 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC19.21■□□□□ 0.67
VCLP18206 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC19.21■□□□□ 0.67
VCLP18206 C1QL1P1-201ENST00000568105 661 ntBASIC19.21■□□□□ 0.67
VCLP18206 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC19.21■□□□□ 0.67
VCLP18206 RPS15-203ENST00000586096 570 ntTSL 2 BASIC19.21■□□□□ 0.67
VCLP18206 AL353708.3-201ENST00000610272 989 ntBASIC19.21■□□□□ 0.67
VCLP18206 AL049637.2-201ENST00000641778 930 ntBASIC19.21■□□□□ 0.67
VCLP18206 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
VCLP18206 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC19.21■□□□□ 0.67
VCLP18206 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
VCLP18206 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC19.21■□□□□ 0.67
VCLP18206 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
VCLP18206 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
VCLP18206 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
VCLP18206 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
VCLP18206 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
VCLP18206 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC19.2■□□□□ 0.66
VCLP18206 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC19.2■□□□□ 0.66
VCLP18206 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
VCLP18206 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
VCLP18206 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
VCLP18206 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC19.2■□□□□ 0.66
VCLP18206 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
VCLP18206 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC19.2■□□□□ 0.66
VCLP18206 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC19.2■□□□□ 0.66
VCLP18206 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC19.2■□□□□ 0.66
VCLP18206 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
VCLP18206 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
VCLP18206 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
VCLP18206 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC19.2■□□□□ 0.66
VCLP18206 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC19.2■□□□□ 0.66
VCLP18206 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC19.2■□□□□ 0.66
VCLP18206 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC19.2■□□□□ 0.66
VCLP18206 AC073195.1-201ENST00000607241 877 ntBASIC19.2■□□□□ 0.66
VCLP18206 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC19.2■□□□□ 0.66
VCLP18206 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
VCLP18206 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
VCLP18206 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC19.2■□□□□ 0.66
VCLP18206 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC19.2■□□□□ 0.66
VCLP18206 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC19.19■□□□□ 0.66
VCLP18206 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC19.19■□□□□ 0.66
VCLP18206 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
VCLP18206 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
VCLP18206 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
VCLP18206 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
VCLP18206 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
VCLP18206 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC19.19■□□□□ 0.66
VCLP18206 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
VCLP18206 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
VCLP18206 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.19■□□□□ 0.66
VCLP18206 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
VCLP18206 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC19.19■□□□□ 0.66
VCLP18206 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC19.19■□□□□ 0.66
VCLP18206 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.19■□□□□ 0.66
VCLP18206 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC19.19■□□□□ 0.66
VCLP18206 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.19■□□□□ 0.66
VCLP18206 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
VCLP18206 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC19.19■□□□□ 0.66
VCLP18206 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
VCLP18206 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
VCLP18206 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
VCLP18206 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC19.19■□□□□ 0.66
VCLP18206 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC19.19■□□□□ 0.66
VCLP18206 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
VCLP18206 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
VCLP18206 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
VCLP18206 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
VCLP18206 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
VCLP18206 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
VCLP18206 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
VCLP18206 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC19.18■□□□□ 0.66
VCLP18206 KRT8P8-201ENST00000434750 1448 ntBASIC19.18■□□□□ 0.66
VCLP18206 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
VCLP18206 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
VCLP18206 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC19.18■□□□□ 0.66
VCLP18206 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
VCLP18206 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
VCLP18206 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC19.18■□□□□ 0.66
VCLP18206 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC19.18■□□□□ 0.66
VCLP18206 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
VCLP18206 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
VCLP18206 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
VCLP18206 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
VCLP18206 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
VCLP18206 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
VCLP18206 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
VCLP18206 AC007613.1-201ENST00000572811 2597 ntBASIC19.18■□□□□ 0.66
VCLP18206 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
VCLP18206 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
VCLP18206 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
VCLP18206 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
VCLP18206 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
VCLP18206 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
VCLP18206 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
VCLP18206 AC093484.2-201ENST00000580996 2166 ntBASIC19.17■□□□□ 0.66
VCLP18206 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC19.17■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms