Protein–RNA interactions for Protein: P13994

CCDC130, Coiled-coil domain-containing protein 130, humanhuman

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC130P13994 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
CCDC130P13994 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CCDC130P13994 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC20.25■□□□□ 0.83
CCDC130P13994 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CCDC130P13994 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CCDC130P13994 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
CCDC130P13994 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CCDC130P13994 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
CCDC130P13994 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CCDC130P13994 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC20.25■□□□□ 0.83
CCDC130P13994 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
CCDC130P13994 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CCDC130P13994 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CCDC130P13994 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CCDC130P13994 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC20.25■□□□□ 0.83
CCDC130P13994 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CCDC130P13994 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC20.25■□□□□ 0.83
CCDC130P13994 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC20.25■□□□□ 0.83
CCDC130P13994 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC20.25■□□□□ 0.83
CCDC130P13994 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
CCDC130P13994 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC20.25■□□□□ 0.83
CCDC130P13994 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CCDC130P13994 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC20.25■□□□□ 0.83
CCDC130P13994 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CCDC130P13994 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
CCDC130P13994 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CCDC130P13994 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
CCDC130P13994 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC20.24■□□□□ 0.83
CCDC130P13994 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC20.24■□□□□ 0.83
CCDC130P13994 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CCDC130P13994 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC20.24■□□□□ 0.83
CCDC130P13994 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CCDC130P13994 ECEL1P3-201ENST00000427961 737 ntBASIC20.24■□□□□ 0.83
CCDC130P13994 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CCDC130P13994 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC20.24■□□□□ 0.83
CCDC130P13994 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CCDC130P13994 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC20.24■□□□□ 0.83
CCDC130P13994 PRSS44-201ENST00000515154 1146 ntBASIC20.24■□□□□ 0.83
CCDC130P13994 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC20.24■□□□□ 0.83
CCDC130P13994 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC20.24■□□□□ 0.83
CCDC130P13994 NAPSB-206ENST00000562112 1266 ntBASIC20.24■□□□□ 0.83
CCDC130P13994 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC20.24■□□□□ 0.83
CCDC130P13994 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CCDC130P13994 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC20.24■□□□□ 0.83
CCDC130P13994 AC005332.7-201ENST00000614046 2005 ntBASIC20.24■□□□□ 0.83
CCDC130P13994 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC20.24■□□□□ 0.83
CCDC130P13994 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CCDC130P13994 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CCDC130P13994 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CCDC130P13994 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
CCDC130P13994 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CCDC130P13994 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CCDC130P13994 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CCDC130P13994 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CCDC130P13994 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CCDC130P13994 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC20.23■□□□□ 0.83
CCDC130P13994 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC20.23■□□□□ 0.83
CCDC130P13994 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CCDC130P13994 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CCDC130P13994 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
CCDC130P13994 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
CCDC130P13994 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
CCDC130P13994 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CCDC130P13994 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC20.23■□□□□ 0.83
CCDC130P13994 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC20.23■□□□□ 0.83
CCDC130P13994 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CCDC130P13994 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC20.23■□□□□ 0.83
CCDC130P13994 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC20.23■□□□□ 0.83
CCDC130P13994 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC20.23■□□□□ 0.83
CCDC130P13994 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
CCDC130P13994 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
CCDC130P13994 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CCDC130P13994 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC20.23■□□□□ 0.83
CCDC130P13994 GAS2L1P1-201ENST00000420145 1480 ntBASIC20.23■□□□□ 0.83
CCDC130P13994 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CCDC130P13994 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC20.23■□□□□ 0.83
CCDC130P13994 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CCDC130P13994 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CCDC130P13994 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CCDC130P13994 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC20.22■□□□□ 0.83
CCDC130P13994 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC20.22■□□□□ 0.83
CCDC130P13994 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC20.22■□□□□ 0.83
CCDC130P13994 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CCDC130P13994 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC20.22■□□□□ 0.83
CCDC130P13994 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CCDC130P13994 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
CCDC130P13994 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC20.22■□□□□ 0.83
CCDC130P13994 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CCDC130P13994 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CCDC130P13994 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC20.22■□□□□ 0.83
CCDC130P13994 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC20.22■□□□□ 0.83
CCDC130P13994 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CCDC130P13994 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC20.22■□□□□ 0.83
CCDC130P13994 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC20.22■□□□□ 0.83
CCDC130P13994 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC20.22■□□□□ 0.83
CCDC130P13994 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC20.22■□□□□ 0.83
CCDC130P13994 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CCDC130P13994 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC20.22■□□□□ 0.83
CCDC130P13994 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC20.22■□□□□ 0.83
CCDC130P13994 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms