Protein–RNA interactions for Protein: P13942

COL11A2, Collagen alpha-2(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,736 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A2P13942 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC23.44■■□□□ 1.34
COL11A2P13942 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC23.44■■□□□ 1.34
COL11A2P13942 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC23.44■■□□□ 1.34
COL11A2P13942 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC23.44■■□□□ 1.34
COL11A2P13942 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC23.44■■□□□ 1.34
COL11A2P13942 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC23.43■■□□□ 1.34
COL11A2P13942 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC23.43■■□□□ 1.34
COL11A2P13942 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
COL11A2P13942 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC23.43■■□□□ 1.34
COL11A2P13942 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC23.43■■□□□ 1.34
COL11A2P13942 SDHAP1-207ENST00000440850 2000 ntBASIC23.43■■□□□ 1.34
COL11A2P13942 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
COL11A2P13942 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC23.43■■□□□ 1.34
COL11A2P13942 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC23.43■■□□□ 1.34
COL11A2P13942 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC23.43■■□□□ 1.34
COL11A2P13942 MCCD1P1-208ENST00000445732 328 ntBASIC23.43■■□□□ 1.34
COL11A2P13942 NUS1P1-201ENST00000446295 882 ntBASIC23.43■■□□□ 1.34
COL11A2P13942 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC23.43■■□□□ 1.34
COL11A2P13942 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC23.43■■□□□ 1.34
COL11A2P13942 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC23.43■■□□□ 1.34
COL11A2P13942 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC23.43■■□□□ 1.34
COL11A2P13942 AC074051.2-201ENST00000565115 352 ntBASIC23.43■■□□□ 1.34
COL11A2P13942 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC23.43■■□□□ 1.34
COL11A2P13942 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC23.43■■□□□ 1.34
COL11A2P13942 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC23.43■■□□□ 1.34
COL11A2P13942 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
COL11A2P13942 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC23.43■■□□□ 1.34
COL11A2P13942 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC23.43■■□□□ 1.34
COL11A2P13942 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC23.42■■□□□ 1.34
COL11A2P13942 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
COL11A2P13942 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
COL11A2P13942 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC23.42■■□□□ 1.34
COL11A2P13942 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC23.42■■□□□ 1.34
COL11A2P13942 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC23.42■■□□□ 1.34
COL11A2P13942 AP000867.3-201ENST00000524675 377 ntBASIC23.42■■□□□ 1.34
COL11A2P13942 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC23.42■■□□□ 1.34
COL11A2P13942 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC23.42■■□□□ 1.34
COL11A2P13942 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC23.42■■□□□ 1.34
COL11A2P13942 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC23.42■■□□□ 1.34
COL11A2P13942 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC23.42■■□□□ 1.34
COL11A2P13942 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC23.42■■□□□ 1.34
COL11A2P13942 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC23.42■■□□□ 1.34
COL11A2P13942 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC23.42■■□□□ 1.34
COL11A2P13942 MIR662-201ENST00000384847 95 ntBASIC23.42■■□□□ 1.34
COL11A2P13942 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC23.42■■□□□ 1.34
COL11A2P13942 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC23.42■■□□□ 1.34
COL11A2P13942 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
COL11A2P13942 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
COL11A2P13942 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC23.41■■□□□ 1.34
COL11A2P13942 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC23.41■■□□□ 1.34
COL11A2P13942 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC23.41■■□□□ 1.34
COL11A2P13942 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC23.41■■□□□ 1.34
COL11A2P13942 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
COL11A2P13942 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC23.41■■□□□ 1.34
COL11A2P13942 KRT18P31-201ENST00000506277 1292 ntBASIC23.41■■□□□ 1.34
COL11A2P13942 TP73-AS1-207ENST00000624167 988 ntBASIC23.41■■□□□ 1.34
COL11A2P13942 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC23.41■■□□□ 1.34
COL11A2P13942 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC23.41■■□□□ 1.34
COL11A2P13942 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC23.41■■□□□ 1.34
COL11A2P13942 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
COL11A2P13942 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
COL11A2P13942 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC23.4■■□□□ 1.34
COL11A2P13942 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC23.4■■□□□ 1.34
COL11A2P13942 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC23.4■■□□□ 1.34
COL11A2P13942 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC23.4■■□□□ 1.34
COL11A2P13942 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC23.4■■□□□ 1.34
COL11A2P13942 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC23.4■■□□□ 1.34
COL11A2P13942 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC23.4■■□□□ 1.34
COL11A2P13942 FOSL1P1-201ENST00000511041 816 ntBASIC23.4■■□□□ 1.34
COL11A2P13942 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC23.4■■□□□ 1.34
COL11A2P13942 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC23.4■■□□□ 1.34
COL11A2P13942 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC23.4■■□□□ 1.34
COL11A2P13942 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
COL11A2P13942 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.34
COL11A2P13942 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC23.39■■□□□ 1.34
COL11A2P13942 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC23.39■■□□□ 1.34
COL11A2P13942 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC23.39■■□□□ 1.34
COL11A2P13942 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC23.39■■□□□ 1.34
COL11A2P13942 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC23.39■■□□□ 1.34
COL11A2P13942 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.34
COL11A2P13942 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC23.39■■□□□ 1.33
COL11A2P13942 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC23.39■■□□□ 1.33
COL11A2P13942 KRT16P4-201ENST00000453883 522 ntBASIC23.39■■□□□ 1.33
COL11A2P13942 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC23.39■■□□□ 1.33
COL11A2P13942 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC23.39■■□□□ 1.33
COL11A2P13942 AC006538.3-201ENST00000612495 578 ntBASIC23.39■■□□□ 1.33
COL11A2P13942 LITAF-220ENST00000620789 692 ntTSL 5 BASIC23.39■■□□□ 1.33
COL11A2P13942 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC23.39■■□□□ 1.33
COL11A2P13942 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC23.39■■□□□ 1.33
COL11A2P13942 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
COL11A2P13942 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC23.38■■□□□ 1.33
COL11A2P13942 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC23.38■■□□□ 1.33
COL11A2P13942 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC23.38■■□□□ 1.33
COL11A2P13942 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
COL11A2P13942 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
COL11A2P13942 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC23.38■■□□□ 1.33
COL11A2P13942 IL11-204ENST00000590625 1028 ntTSL 2 BASIC23.38■■□□□ 1.33
COL11A2P13942 GXYLT1P4-201ENST00000613576 1192 ntBASIC23.38■■□□□ 1.33
COL11A2P13942 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
COL11A2P13942 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms