Protein–RNA interactions for Protein: P10747

CD28, T-cell-specific surface glycoprotein CD28, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD28P10747 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC14.94□□□□□ -0.02
CD28P10747 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
CD28P10747 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC14.94□□□□□ -0.02
CD28P10747 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
CD28P10747 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CD28P10747 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CD28P10747 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CD28P10747 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CD28P10747 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC14.94□□□□□ -0.02
CD28P10747 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
CD28P10747 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CD28P10747 COPE-203ENST00000351079 907 ntTSL 2 BASIC14.94□□□□□ -0.02
CD28P10747 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CD28P10747 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CD28P10747 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
CD28P10747 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
CD28P10747 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC14.94□□□□□ -0.02
CD28P10747 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
CD28P10747 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC14.94□□□□□ -0.02
CD28P10747 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
CD28P10747 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC14.94□□□□□ -0.02
CD28P10747 GXYLT1P6-201ENST00000456472 1187 ntBASIC14.94□□□□□ -0.02
CD28P10747 AC092647.4-201ENST00000457211 535 ntBASIC14.94□□□□□ -0.02
CD28P10747 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC14.94□□□□□ -0.02
CD28P10747 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC14.94□□□□□ -0.02
CD28P10747 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CD28P10747 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC14.94□□□□□ -0.02
CD28P10747 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC14.94□□□□□ -0.02
CD28P10747 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CD28P10747 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
CD28P10747 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CD28P10747 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CD28P10747 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
CD28P10747 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
CD28P10747 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
CD28P10747 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
CD28P10747 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC14.94□□□□□ -0.02
CD28P10747 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
CD28P10747 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
CD28P10747 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
CD28P10747 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC14.93□□□□□ -0.02
CD28P10747 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CD28P10747 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC14.93□□□□□ -0.02
CD28P10747 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CD28P10747 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC14.93□□□□□ -0.02
CD28P10747 ANKRD18DP-204ENST00000455355 1975 ntBASIC14.93□□□□□ -0.02
CD28P10747 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
CD28P10747 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CD28P10747 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
CD28P10747 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC14.93□□□□□ -0.02
CD28P10747 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
CD28P10747 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CD28P10747 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC14.93□□□□□ -0.02
CD28P10747 TSPY5P-201ENST00000426936 936 ntBASIC14.93□□□□□ -0.02
CD28P10747 CA15P1-201ENST00000481698 905 ntBASIC14.93□□□□□ -0.02
CD28P10747 AP003041.3-201ENST00000527151 707 ntBASIC14.93□□□□□ -0.02
CD28P10747 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
CD28P10747 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC14.93□□□□□ -0.02
CD28P10747 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC14.93□□□□□ -0.02
CD28P10747 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CD28P10747 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
CD28P10747 AC099778.1-201ENST00000568593 1911 ntBASIC14.93□□□□□ -0.02
CD28P10747 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
CD28P10747 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC14.93□□□□□ -0.02
CD28P10747 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC14.93□□□□□ -0.02
CD28P10747 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC14.93□□□□□ -0.02
CD28P10747 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC14.93□□□□□ -0.02
CD28P10747 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CD28P10747 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CD28P10747 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
CD28P10747 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
CD28P10747 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CD28P10747 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC14.93□□□□□ -0.02
CD28P10747 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CD28P10747 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC14.93□□□□□ -0.02
CD28P10747 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC14.92□□□□□ -0.02
CD28P10747 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
CD28P10747 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CD28P10747 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CD28P10747 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC14.92□□□□□ -0.02
CD28P10747 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CD28P10747 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CD28P10747 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CD28P10747 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
CD28P10747 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CD28P10747 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC14.92□□□□□ -0.02
CD28P10747 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CD28P10747 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC14.92□□□□□ -0.02
CD28P10747 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
CD28P10747 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC14.92□□□□□ -0.02
CD28P10747 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CD28P10747 AC011558.1-201ENST00000623459 338 ntBASIC14.92□□□□□ -0.02
CD28P10747 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC14.92□□□□□ -0.02
CD28P10747 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CD28P10747 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CD28P10747 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
CD28P10747 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
CD28P10747 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC14.92□□□□□ -0.02
CD28P10747 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CD28P10747 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms