Protein–RNA interactions for Protein: P0DP91

CSB-PGBD3, Chimeric ERCC6-PGBD3 protein, humanhuman

Predictions only

Length 1,061 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSB-PGBD3P0DP91 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
CSB-PGBD3P0DP91 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC25.33■■□□□ 1.65
CSB-PGBD3P0DP91 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
CSB-PGBD3P0DP91 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC25.33■■□□□ 1.65
CSB-PGBD3P0DP91 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC25.33■■□□□ 1.65
CSB-PGBD3P0DP91 MIR3180-1-201ENST00000580374 94 ntBASIC25.33■■□□□ 1.65
CSB-PGBD3P0DP91 MIR3180-3-201ENST00000584616 94 ntBASIC25.33■■□□□ 1.65
CSB-PGBD3P0DP91 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
CSB-PGBD3P0DP91 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
CSB-PGBD3P0DP91 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
CSB-PGBD3P0DP91 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC25.33■■□□□ 1.65
CSB-PGBD3P0DP91 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC25.33■■□□□ 1.65
CSB-PGBD3P0DP91 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.64
CSB-PGBD3P0DP91 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.64
CSB-PGBD3P0DP91 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC25.32■■□□□ 1.64
CSB-PGBD3P0DP91 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
CSB-PGBD3P0DP91 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
CSB-PGBD3P0DP91 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC25.32■■□□□ 1.64
CSB-PGBD3P0DP91 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
CSB-PGBD3P0DP91 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC25.32■■□□□ 1.64
CSB-PGBD3P0DP91 UNC93B7-201ENST00000509439 705 ntBASIC25.32■■□□□ 1.64
CSB-PGBD3P0DP91 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC25.32■■□□□ 1.64
CSB-PGBD3P0DP91 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC25.32■■□□□ 1.64
CSB-PGBD3P0DP91 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC25.32■■□□□ 1.64
CSB-PGBD3P0DP91 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC25.32■■□□□ 1.64
CSB-PGBD3P0DP91 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
CSB-PGBD3P0DP91 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC25.32■■□□□ 1.64
CSB-PGBD3P0DP91 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC25.32■■□□□ 1.64
CSB-PGBD3P0DP91 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC25.32■■□□□ 1.64
CSB-PGBD3P0DP91 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
CSB-PGBD3P0DP91 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
CSB-PGBD3P0DP91 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC25.31■■□□□ 1.64
CSB-PGBD3P0DP91 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC25.31■■□□□ 1.64
CSB-PGBD3P0DP91 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
CSB-PGBD3P0DP91 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
CSB-PGBD3P0DP91 AP002383.4-201ENST00000442518 975 ntBASIC25.31■■□□□ 1.64
CSB-PGBD3P0DP91 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
CSB-PGBD3P0DP91 FDX1P1-201ENST00000449115 551 ntBASIC25.31■■□□□ 1.64
CSB-PGBD3P0DP91 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC25.31■■□□□ 1.64
CSB-PGBD3P0DP91 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
CSB-PGBD3P0DP91 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC25.31■■□□□ 1.64
CSB-PGBD3P0DP91 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC25.31■■□□□ 1.64
CSB-PGBD3P0DP91 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
CSB-PGBD3P0DP91 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC25.31■■□□□ 1.64
CSB-PGBD3P0DP91 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC25.31■■□□□ 1.64
CSB-PGBD3P0DP91 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC25.31■■□□□ 1.64
CSB-PGBD3P0DP91 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC25.31■■□□□ 1.64
CSB-PGBD3P0DP91 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
CSB-PGBD3P0DP91 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC25.31■■□□□ 1.64
CSB-PGBD3P0DP91 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
CSB-PGBD3P0DP91 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC25.3■■□□□ 1.64
CSB-PGBD3P0DP91 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
CSB-PGBD3P0DP91 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC25.3■■□□□ 1.64
CSB-PGBD3P0DP91 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
CSB-PGBD3P0DP91 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
CSB-PGBD3P0DP91 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC25.3■■□□□ 1.64
CSB-PGBD3P0DP91 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC25.3■■□□□ 1.64
CSB-PGBD3P0DP91 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
CSB-PGBD3P0DP91 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
CSB-PGBD3P0DP91 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC25.3■■□□□ 1.64
CSB-PGBD3P0DP91 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC25.3■■□□□ 1.64
CSB-PGBD3P0DP91 AP002414.4-201ENST00000589764 1148 ntBASIC25.3■■□□□ 1.64
CSB-PGBD3P0DP91 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC25.3■■□□□ 1.64
CSB-PGBD3P0DP91 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
CSB-PGBD3P0DP91 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC25.3■■□□□ 1.64
CSB-PGBD3P0DP91 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
CSB-PGBD3P0DP91 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
CSB-PGBD3P0DP91 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC25.3■■□□□ 1.64
CSB-PGBD3P0DP91 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
CSB-PGBD3P0DP91 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC25.29■■□□□ 1.64
CSB-PGBD3P0DP91 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
CSB-PGBD3P0DP91 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC25.29■■□□□ 1.64
CSB-PGBD3P0DP91 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC25.29■■□□□ 1.64
CSB-PGBD3P0DP91 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
CSB-PGBD3P0DP91 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC25.29■■□□□ 1.64
CSB-PGBD3P0DP91 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC25.29■■□□□ 1.64
CSB-PGBD3P0DP91 AL023284.2-201ENST00000405850 579 ntBASIC25.29■■□□□ 1.64
CSB-PGBD3P0DP91 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC25.29■■□□□ 1.64
CSB-PGBD3P0DP91 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC25.29■■□□□ 1.64
CSB-PGBD3P0DP91 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC25.29■■□□□ 1.64
CSB-PGBD3P0DP91 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC25.29■■□□□ 1.64
CSB-PGBD3P0DP91 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC25.29■■□□□ 1.64
CSB-PGBD3P0DP91 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC25.29■■□□□ 1.64
CSB-PGBD3P0DP91 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
CSB-PGBD3P0DP91 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
CSB-PGBD3P0DP91 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
CSB-PGBD3P0DP91 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
CSB-PGBD3P0DP91 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC25.28■■□□□ 1.64
CSB-PGBD3P0DP91 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC25.28■■□□□ 1.64
CSB-PGBD3P0DP91 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC25.28■■□□□ 1.64
CSB-PGBD3P0DP91 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC25.28■■□□□ 1.64
CSB-PGBD3P0DP91 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC25.28■■□□□ 1.64
CSB-PGBD3P0DP91 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC25.28■■□□□ 1.64
CSB-PGBD3P0DP91 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC25.28■■□□□ 1.64
CSB-PGBD3P0DP91 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC25.28■■□□□ 1.64
CSB-PGBD3P0DP91 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC25.28■■□□□ 1.64
CSB-PGBD3P0DP91 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
CSB-PGBD3P0DP91 ZNF815P-204ENST00000434898 1737 ntBASIC25.28■■□□□ 1.64
CSB-PGBD3P0DP91 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
CSB-PGBD3P0DP91 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC25.28■■□□□ 1.64
Retrieved 100 of 98,524 protein–RNA pairs in 47.6 ms