Protein–RNA interactions for Protein: P0DJJ0

SRGAP2C, SLIT-ROBO Rho GTPase-activating protein 2C, humanhuman

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP2CP0DJJ0 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
SRGAP2CP0DJJ0 Z82202.1-201ENST00000623446 1880 ntBASIC21.03■□□□□ 0.96
SRGAP2CP0DJJ0 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
SRGAP2CP0DJJ0 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
SRGAP2CP0DJJ0 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC21.03■□□□□ 0.96
SRGAP2CP0DJJ0 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
SRGAP2CP0DJJ0 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
SRGAP2CP0DJJ0 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC21.03■□□□□ 0.96
SRGAP2CP0DJJ0 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
SRGAP2CP0DJJ0 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC21.03■□□□□ 0.96
SRGAP2CP0DJJ0 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
SRGAP2CP0DJJ0 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
SRGAP2CP0DJJ0 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
SRGAP2CP0DJJ0 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC21.03■□□□□ 0.96
SRGAP2CP0DJJ0 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
SRGAP2CP0DJJ0 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC21.03■□□□□ 0.96
SRGAP2CP0DJJ0 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC21.03■□□□□ 0.96
SRGAP2CP0DJJ0 CA15P1-201ENST00000481698 905 ntBASIC21.03■□□□□ 0.96
SRGAP2CP0DJJ0 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC21.03■□□□□ 0.96
SRGAP2CP0DJJ0 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
SRGAP2CP0DJJ0 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
SRGAP2CP0DJJ0 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC21.03■□□□□ 0.96
SRGAP2CP0DJJ0 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
SRGAP2CP0DJJ0 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
SRGAP2CP0DJJ0 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC21.03■□□□□ 0.96
SRGAP2CP0DJJ0 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC21.03■□□□□ 0.96
SRGAP2CP0DJJ0 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC21.03■□□□□ 0.96
SRGAP2CP0DJJ0 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
SRGAP2CP0DJJ0 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC21.02■□□□□ 0.96
SRGAP2CP0DJJ0 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC21.02■□□□□ 0.96
SRGAP2CP0DJJ0 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC21.02■□□□□ 0.96
SRGAP2CP0DJJ0 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
SRGAP2CP0DJJ0 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
SRGAP2CP0DJJ0 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
SRGAP2CP0DJJ0 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
SRGAP2CP0DJJ0 HMGA1P5-201ENST00000412453 271 ntBASIC21.02■□□□□ 0.96
SRGAP2CP0DJJ0 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC21.02■□□□□ 0.96
SRGAP2CP0DJJ0 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC21.02■□□□□ 0.96
SRGAP2CP0DJJ0 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC21.02■□□□□ 0.96
SRGAP2CP0DJJ0 AC010653.2-201ENST00000623505 997 ntBASIC21.02■□□□□ 0.96
SRGAP2CP0DJJ0 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
SRGAP2CP0DJJ0 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
SRGAP2CP0DJJ0 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC21.02■□□□□ 0.96
SRGAP2CP0DJJ0 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
SRGAP2CP0DJJ0 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
SRGAP2CP0DJJ0 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
SRGAP2CP0DJJ0 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC21.02■□□□□ 0.96
SRGAP2CP0DJJ0 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC21.02■□□□□ 0.96
SRGAP2CP0DJJ0 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
SRGAP2CP0DJJ0 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.95
SRGAP2CP0DJJ0 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
SRGAP2CP0DJJ0 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SRGAP2CP0DJJ0 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SRGAP2CP0DJJ0 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
SRGAP2CP0DJJ0 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SRGAP2CP0DJJ0 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
SRGAP2CP0DJJ0 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SRGAP2CP0DJJ0 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC21.01■□□□□ 0.95
SRGAP2CP0DJJ0 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
SRGAP2CP0DJJ0 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
SRGAP2CP0DJJ0 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
SRGAP2CP0DJJ0 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
SRGAP2CP0DJJ0 TSPY21P-201ENST00000433481 731 ntBASIC21.01■□□□□ 0.95
SRGAP2CP0DJJ0 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SRGAP2CP0DJJ0 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
SRGAP2CP0DJJ0 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC21.01■□□□□ 0.95
SRGAP2CP0DJJ0 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
SRGAP2CP0DJJ0 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
SRGAP2CP0DJJ0 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC21.01■□□□□ 0.95
SRGAP2CP0DJJ0 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SRGAP2CP0DJJ0 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
SRGAP2CP0DJJ0 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC21■□□□□ 0.95
SRGAP2CP0DJJ0 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC21■□□□□ 0.95
SRGAP2CP0DJJ0 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SRGAP2CP0DJJ0 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC21■□□□□ 0.95
SRGAP2CP0DJJ0 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
SRGAP2CP0DJJ0 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
SRGAP2CP0DJJ0 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC21■□□□□ 0.95
SRGAP2CP0DJJ0 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC21■□□□□ 0.95
SRGAP2CP0DJJ0 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC21■□□□□ 0.95
SRGAP2CP0DJJ0 AP003041.3-201ENST00000527151 707 ntBASIC21■□□□□ 0.95
SRGAP2CP0DJJ0 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC21■□□□□ 0.95
SRGAP2CP0DJJ0 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC21■□□□□ 0.95
SRGAP2CP0DJJ0 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC21■□□□□ 0.95
SRGAP2CP0DJJ0 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC21■□□□□ 0.95
SRGAP2CP0DJJ0 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
SRGAP2CP0DJJ0 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC21■□□□□ 0.95
SRGAP2CP0DJJ0 POLI-202ENST00000406285 2030 ntTSL 2 BASIC21■□□□□ 0.95
SRGAP2CP0DJJ0 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SRGAP2CP0DJJ0 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SRGAP2CP0DJJ0 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SRGAP2CP0DJJ0 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SRGAP2CP0DJJ0 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
SRGAP2CP0DJJ0 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
SRGAP2CP0DJJ0 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
SRGAP2CP0DJJ0 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
SRGAP2CP0DJJ0 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SRGAP2CP0DJJ0 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC20.99■□□□□ 0.95
SRGAP2CP0DJJ0 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
SRGAP2CP0DJJ0 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms