Protein–RNA interactions for Protein: P0CG40

SP9, Transcription factor Sp9, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SP9P0CG40 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC18.86■□□□□ 0.61
SP9P0CG40 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SP9P0CG40 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
SP9P0CG40 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
SP9P0CG40 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
SP9P0CG40 GOLGA2P11-201ENST00000562660 1621 ntBASIC18.85■□□□□ 0.61
SP9P0CG40 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC18.85■□□□□ 0.61
SP9P0CG40 PMS2P7-201ENST00000506558 1336 ntBASIC18.85■□□□□ 0.61
SP9P0CG40 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
SP9P0CG40 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
SP9P0CG40 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SP9P0CG40 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC18.85■□□□□ 0.61
SP9P0CG40 IGHV3-47-201ENST00000425060 335 ntBASIC18.85■□□□□ 0.61
SP9P0CG40 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC18.85■□□□□ 0.61
SP9P0CG40 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
SP9P0CG40 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
SP9P0CG40 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
SP9P0CG40 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
SP9P0CG40 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SP9P0CG40 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
SP9P0CG40 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC18.84■□□□□ 0.61
SP9P0CG40 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
SP9P0CG40 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SP9P0CG40 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC18.84■□□□□ 0.61
SP9P0CG40 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SP9P0CG40 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SP9P0CG40 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
SP9P0CG40 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC18.84■□□□□ 0.61
SP9P0CG40 LSM5-204ENST00000409909 740 ntTSL 2 BASIC18.84■□□□□ 0.61
SP9P0CG40 BX842568.4-201ENST00000421222 227 ntBASIC18.84■□□□□ 0.61
SP9P0CG40 MCCD1P1-208ENST00000445732 328 ntBASIC18.84■□□□□ 0.61
SP9P0CG40 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
SP9P0CG40 FAM197Y8-203ENST00000450145 560 ntBASIC18.84■□□□□ 0.61
SP9P0CG40 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC18.84■□□□□ 0.61
SP9P0CG40 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC18.84■□□□□ 0.61
SP9P0CG40 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC18.84■□□□□ 0.61
SP9P0CG40 AC106730.1-201ENST00000566722 1090 ntBASIC18.84■□□□□ 0.61
SP9P0CG40 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC18.84■□□□□ 0.61
SP9P0CG40 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC18.84■□□□□ 0.61
SP9P0CG40 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
SP9P0CG40 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
SP9P0CG40 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SP9P0CG40 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC18.84■□□□□ 0.61
SP9P0CG40 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
SP9P0CG40 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
SP9P0CG40 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
SP9P0CG40 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
SP9P0CG40 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
SP9P0CG40 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
SP9P0CG40 AL031284.1-201ENST00000419297 478 ntBASIC18.83■□□□□ 0.6
SP9P0CG40 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC18.83■□□□□ 0.6
SP9P0CG40 COX10-202ENST00000429152 875 ntTSL 2 BASIC18.83■□□□□ 0.6
SP9P0CG40 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC18.83■□□□□ 0.6
SP9P0CG40 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC18.83■□□□□ 0.6
SP9P0CG40 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC18.83■□□□□ 0.6
SP9P0CG40 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC18.83■□□□□ 0.6
SP9P0CG40 BET1L-206ENST00000486280 665 ntTSL 3 BASIC18.83■□□□□ 0.6
SP9P0CG40 RNPS1P1-201ENST00000507437 918 ntBASIC18.83■□□□□ 0.6
SP9P0CG40 ABR-217ENST00000572441 563 ntTSL 4 BASIC18.83■□□□□ 0.6
SP9P0CG40 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC18.83■□□□□ 0.6
SP9P0CG40 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC18.83■□□□□ 0.6
SP9P0CG40 TERC-201ENST00000602385 541 ntBASIC18.83■□□□□ 0.6
SP9P0CG40 HOTTIP_1.1-201ENST00000620415 57 ntBASIC18.83■□□□□ 0.6
SP9P0CG40 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
SP9P0CG40 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
SP9P0CG40 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SP9P0CG40 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SP9P0CG40 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
SP9P0CG40 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
SP9P0CG40 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
SP9P0CG40 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC18.83■□□□□ 0.6
SP9P0CG40 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC18.82■□□□□ 0.6
SP9P0CG40 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SP9P0CG40 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SP9P0CG40 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
SP9P0CG40 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC18.82■□□□□ 0.6
SP9P0CG40 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC18.82■□□□□ 0.6
SP9P0CG40 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SP9P0CG40 FABP5-202ENST00000396359 986 ntTSL 5 BASIC18.82■□□□□ 0.6
SP9P0CG40 HMGN1P19-201ENST00000436976 333 ntBASIC18.82■□□□□ 0.6
SP9P0CG40 AP003733.1-201ENST00000491725 852 ntBASIC18.82■□□□□ 0.6
SP9P0CG40 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC18.82■□□□□ 0.6
SP9P0CG40 AL390719.2-201ENST00000606993 987 ntBASIC18.82■□□□□ 0.6
SP9P0CG40 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
SP9P0CG40 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
SP9P0CG40 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SP9P0CG40 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC18.81■□□□□ 0.6
SP9P0CG40 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
SP9P0CG40 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SP9P0CG40 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
SP9P0CG40 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
SP9P0CG40 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SP9P0CG40 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SP9P0CG40 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC18.81■□□□□ 0.6
SP9P0CG40 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SP9P0CG40 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC18.81■□□□□ 0.6
SP9P0CG40 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
SP9P0CG40 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC18.81■□□□□ 0.6
SP9P0CG40 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC18.81■□□□□ 0.6
SP9P0CG40 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC18.81■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms