Protein–RNA interactions for Protein: P08254

MMP3, Stromelysin-1, humanhuman

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP3P08254 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
MMP3P08254 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC21.18■□□□□ 0.98
MMP3P08254 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC21.17■□□□□ 0.98
MMP3P08254 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC21.17■□□□□ 0.98
MMP3P08254 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC21.17■□□□□ 0.98
MMP3P08254 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
MMP3P08254 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
MMP3P08254 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
MMP3P08254 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
MMP3P08254 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC21.17■□□□□ 0.98
MMP3P08254 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC21.17■□□□□ 0.98
MMP3P08254 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC21.17■□□□□ 0.98
MMP3P08254 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC21.17■□□□□ 0.98
MMP3P08254 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC21.17■□□□□ 0.98
MMP3P08254 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC21.17■□□□□ 0.98
MMP3P08254 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
MMP3P08254 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
MMP3P08254 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC21.17■□□□□ 0.98
MMP3P08254 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
MMP3P08254 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC21.17■□□□□ 0.98
MMP3P08254 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
MMP3P08254 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
MMP3P08254 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC21.17■□□□□ 0.98
MMP3P08254 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
MMP3P08254 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
MMP3P08254 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC21.16■□□□□ 0.98
MMP3P08254 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC21.16■□□□□ 0.98
MMP3P08254 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
MMP3P08254 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC21.16■□□□□ 0.98
MMP3P08254 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
MMP3P08254 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC21.16■□□□□ 0.98
MMP3P08254 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
MMP3P08254 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
MMP3P08254 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC21.16■□□□□ 0.98
MMP3P08254 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
MMP3P08254 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
MMP3P08254 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
MMP3P08254 HCG4P8-203ENST00000443049 980 ntBASIC21.16■□□□□ 0.98
MMP3P08254 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC21.16■□□□□ 0.98
MMP3P08254 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
MMP3P08254 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC21.16■□□□□ 0.98
MMP3P08254 KRT126P-201ENST00000549467 1181 ntBASIC21.16■□□□□ 0.98
MMP3P08254 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
MMP3P08254 CLN6-214ENST00000636314 442 ntTSL 3 BASIC21.16■□□□□ 0.98
MMP3P08254 PKD1P6-201ENST00000343738 4769 ntBASIC21.16■□□□□ 0.98
MMP3P08254 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
MMP3P08254 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
MMP3P08254 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
MMP3P08254 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
MMP3P08254 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC21.15■□□□□ 0.98
MMP3P08254 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
MMP3P08254 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
MMP3P08254 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC21.15■□□□□ 0.98
MMP3P08254 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
MMP3P08254 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
MMP3P08254 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
MMP3P08254 HBZP1-201ENST00000354915 429 ntBASIC21.15■□□□□ 0.98
MMP3P08254 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC21.15■□□□□ 0.98
MMP3P08254 RASA4DP-201ENST00000460726 1199 ntBASIC21.15■□□□□ 0.98
MMP3P08254 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC21.15■□□□□ 0.98
MMP3P08254 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC21.15■□□□□ 0.98
MMP3P08254 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC21.15■□□□□ 0.98
MMP3P08254 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
MMP3P08254 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC21.15■□□□□ 0.98
MMP3P08254 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC21.15■□□□□ 0.98
MMP3P08254 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC21.15■□□□□ 0.98
MMP3P08254 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC21.15■□□□□ 0.98
MMP3P08254 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
MMP3P08254 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
MMP3P08254 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.98
MMP3P08254 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC21.14■□□□□ 0.98
MMP3P08254 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC21.14■□□□□ 0.98
MMP3P08254 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC21.14■□□□□ 0.98
MMP3P08254 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
MMP3P08254 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
MMP3P08254 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC21.14■□□□□ 0.98
MMP3P08254 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
MMP3P08254 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
MMP3P08254 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
MMP3P08254 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
MMP3P08254 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
MMP3P08254 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
MMP3P08254 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC21.14■□□□□ 0.97
MMP3P08254 DUSP5P1-201ENST00000441325 1139 ntBASIC21.14■□□□□ 0.97
MMP3P08254 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC21.14■□□□□ 0.97
MMP3P08254 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC21.14■□□□□ 0.97
MMP3P08254 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
MMP3P08254 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC21.14■□□□□ 0.97
MMP3P08254 AC024243.1-201ENST00000609234 778 ntBASIC21.14■□□□□ 0.97
MMP3P08254 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC21.14■□□□□ 0.97
MMP3P08254 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC21.14■□□□□ 0.97
MMP3P08254 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC21.14■□□□□ 0.97
MMP3P08254 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC21.14■□□□□ 0.97
MMP3P08254 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
MMP3P08254 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.97
MMP3P08254 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC21.14■□□□□ 0.97
MMP3P08254 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
MMP3P08254 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
MMP3P08254 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
MMP3P08254 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 39.1 ms