Protein–RNA interactions for Protein: P06753

TPM3, Tropomyosin alpha-3 chain, humanhuman

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P06753 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC21.44■■□□□ 1.02
TPM3P06753 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
TPM3P06753 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
TPM3P06753 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
TPM3P06753 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
TPM3P06753 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
TPM3P06753 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC21.44■■□□□ 1.02
TPM3P06753 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC21.43■■□□□ 1.02
TPM3P06753 AL512353.2-201ENST00000448759 1962 ntBASIC21.43■■□□□ 1.02
TPM3P06753 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC21.43■■□□□ 1.02
TPM3P06753 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC21.43■■□□□ 1.02
TPM3P06753 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
TPM3P06753 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC21.43■■□□□ 1.02
TPM3P06753 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC21.43■■□□□ 1.02
TPM3P06753 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC21.43■■□□□ 1.02
TPM3P06753 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC21.43■■□□□ 1.02
TPM3P06753 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC21.43■■□□□ 1.02
TPM3P06753 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
TPM3P06753 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC21.43■■□□□ 1.02
TPM3P06753 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC21.43■■□□□ 1.02
TPM3P06753 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC21.43■■□□□ 1.02
TPM3P06753 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC21.43■■□□□ 1.02
TPM3P06753 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
TPM3P06753 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC21.43■■□□□ 1.02
TPM3P06753 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC21.43■■□□□ 1.02
TPM3P06753 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC21.43■■□□□ 1.02
TPM3P06753 AC068338.2-201ENST00000563278 1430 ntBASIC21.43■■□□□ 1.02
TPM3P06753 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
TPM3P06753 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
TPM3P06753 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC21.43■■□□□ 1.02
TPM3P06753 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC21.43■■□□□ 1.02
TPM3P06753 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
TPM3P06753 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC21.43■■□□□ 1.02
TPM3P06753 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC21.42■■□□□ 1.02
TPM3P06753 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC21.42■■□□□ 1.02
TPM3P06753 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
TPM3P06753 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC21.42■■□□□ 1.02
TPM3P06753 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
TPM3P06753 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
TPM3P06753 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
TPM3P06753 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
TPM3P06753 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
TPM3P06753 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
TPM3P06753 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC21.42■■□□□ 1.02
TPM3P06753 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC21.42■■□□□ 1.02
TPM3P06753 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
TPM3P06753 STX7-201ENST00000367937 1090 ntTSL 5 BASIC21.42■■□□□ 1.02
TPM3P06753 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC21.42■■□□□ 1.02
TPM3P06753 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
TPM3P06753 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC21.42■■□□□ 1.02
TPM3P06753 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC21.42■■□□□ 1.02
TPM3P06753 AC116351.2-201ENST00000606540 1585 ntBASIC21.42■■□□□ 1.02
TPM3P06753 ABALON-201ENST00000629058 1903 ntBASIC21.42■■□□□ 1.02
TPM3P06753 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC21.42■■□□□ 1.02
TPM3P06753 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
TPM3P06753 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
TPM3P06753 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC21.41■■□□□ 1.02
TPM3P06753 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC21.41■■□□□ 1.02
TPM3P06753 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
TPM3P06753 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC21.41■■□□□ 1.02
TPM3P06753 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC21.41■■□□□ 1.02
TPM3P06753 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
TPM3P06753 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC21.41■■□□□ 1.02
TPM3P06753 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC21.41■■□□□ 1.02
TPM3P06753 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
TPM3P06753 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
TPM3P06753 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC21.41■■□□□ 1.02
TPM3P06753 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC21.41■■□□□ 1.02
TPM3P06753 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC21.41■■□□□ 1.02
TPM3P06753 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC21.41■■□□□ 1.02
TPM3P06753 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC21.41■■□□□ 1.02
TPM3P06753 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC21.41■■□□□ 1.02
TPM3P06753 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC21.41■■□□□ 1.02
TPM3P06753 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
TPM3P06753 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
TPM3P06753 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC21.41■■□□□ 1.02
TPM3P06753 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
TPM3P06753 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC21.41■■□□□ 1.02
TPM3P06753 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC21.41■■□□□ 1.02
TPM3P06753 MADD-208ENST00000405573 1823 ntTSL 5 BASIC21.41■■□□□ 1.02
TPM3P06753 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
TPM3P06753 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC21.4■■□□□ 1.02
TPM3P06753 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
TPM3P06753 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC21.4■■□□□ 1.02
TPM3P06753 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
TPM3P06753 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC21.4■■□□□ 1.02
TPM3P06753 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC21.4■■□□□ 1.02
TPM3P06753 AC137761.2-201ENST00000561729 223 ntBASIC21.4■■□□□ 1.02
TPM3P06753 AC145350.3-201ENST00000569033 163 ntBASIC21.4■■□□□ 1.02
TPM3P06753 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC21.4■■□□□ 1.02
TPM3P06753 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
TPM3P06753 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
TPM3P06753 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC21.4■■□□□ 1.02
TPM3P06753 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
TPM3P06753 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
TPM3P06753 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC21.39■■□□□ 1.02
TPM3P06753 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC21.39■■□□□ 1.02
TPM3P06753 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC21.39■■□□□ 1.02
TPM3P06753 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC21.39■■□□□ 1.02
TPM3P06753 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms