Protein–RNA interactions for Protein: P06727

APOA4, Apolipoprotein A-IV, humanhuman

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOA4P06727 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
APOA4P06727 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC19.16■□□□□ 0.66
APOA4P06727 SERF2-207ENST00000409614 582 ntTSL 2 BASIC19.16■□□□□ 0.66
APOA4P06727 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC19.16■□□□□ 0.66
APOA4P06727 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
APOA4P06727 NME1-207ENST00000480143 964 ntTSL 2 BASIC19.16■□□□□ 0.66
APOA4P06727 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC19.16■□□□□ 0.66
APOA4P06727 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC19.16■□□□□ 0.66
APOA4P06727 AC110285.5-201ENST00000611501 352 ntBASIC19.16■□□□□ 0.66
APOA4P06727 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC19.16■□□□□ 0.66
APOA4P06727 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC19.16■□□□□ 0.66
APOA4P06727 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
APOA4P06727 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC19.16■□□□□ 0.66
APOA4P06727 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
APOA4P06727 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
APOA4P06727 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC19.16■□□□□ 0.66
APOA4P06727 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC19.16■□□□□ 0.66
APOA4P06727 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC19.16■□□□□ 0.66
APOA4P06727 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
APOA4P06727 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
APOA4P06727 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
APOA4P06727 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
APOA4P06727 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
APOA4P06727 AC006333.2-201ENST00000607957 2099 ntBASIC19.15■□□□□ 0.66
APOA4P06727 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC19.15■□□□□ 0.66
APOA4P06727 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
APOA4P06727 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
APOA4P06727 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
APOA4P06727 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
APOA4P06727 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC19.15■□□□□ 0.66
APOA4P06727 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
APOA4P06727 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC19.15■□□□□ 0.66
APOA4P06727 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC19.15■□□□□ 0.66
APOA4P06727 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
APOA4P06727 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
APOA4P06727 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
APOA4P06727 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC19.15■□□□□ 0.66
APOA4P06727 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC19.15■□□□□ 0.66
APOA4P06727 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
APOA4P06727 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC19.15■□□□□ 0.66
APOA4P06727 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC19.15■□□□□ 0.66
APOA4P06727 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
APOA4P06727 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC19.15■□□□□ 0.66
APOA4P06727 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
APOA4P06727 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
APOA4P06727 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC19.14■□□□□ 0.66
APOA4P06727 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
APOA4P06727 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC19.14■□□□□ 0.66
APOA4P06727 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
APOA4P06727 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
APOA4P06727 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
APOA4P06727 KRT16P5-201ENST00000455284 522 ntBASIC19.14■□□□□ 0.65
APOA4P06727 RNF121-214ENST00000533380 870 ntTSL 3 BASIC19.14■□□□□ 0.65
APOA4P06727 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
APOA4P06727 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
APOA4P06727 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
APOA4P06727 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC19.14■□□□□ 0.65
APOA4P06727 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
APOA4P06727 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC19.14■□□□□ 0.65
APOA4P06727 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
APOA4P06727 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
APOA4P06727 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
APOA4P06727 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
APOA4P06727 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
APOA4P06727 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
APOA4P06727 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
APOA4P06727 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC19.13■□□□□ 0.65
APOA4P06727 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
APOA4P06727 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC19.13■□□□□ 0.65
APOA4P06727 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC19.13■□□□□ 0.65
APOA4P06727 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
APOA4P06727 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
APOA4P06727 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
APOA4P06727 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
APOA4P06727 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC19.13■□□□□ 0.65
APOA4P06727 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
APOA4P06727 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
APOA4P06727 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
APOA4P06727 ABHD17AP1-201ENST00000358206 933 ntBASIC19.13■□□□□ 0.65
APOA4P06727 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
APOA4P06727 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC19.13■□□□□ 0.65
APOA4P06727 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC19.13■□□□□ 0.65
APOA4P06727 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC19.13■□□□□ 0.65
APOA4P06727 RPPH1-201ENST00000516869 333 ntBASIC19.13■□□□□ 0.65
APOA4P06727 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC19.13■□□□□ 0.65
APOA4P06727 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC19.13■□□□□ 0.65
APOA4P06727 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC19.13■□□□□ 0.65
APOA4P06727 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
APOA4P06727 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
APOA4P06727 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
APOA4P06727 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
APOA4P06727 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
APOA4P06727 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
APOA4P06727 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC19.13■□□□□ 0.65
APOA4P06727 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
APOA4P06727 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
APOA4P06727 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC19.13■□□□□ 0.65
APOA4P06727 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC19.13■□□□□ 0.65
APOA4P06727 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC19.12■□□□□ 0.65
APOA4P06727 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 48.7 ms