Protein–RNA interactions for Protein: P05114

HMGN1, Non-histone chromosomal protein HMG-14, humanhuman

Predictions only

Length 100 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P05114 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
HMGN1P05114 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
HMGN1P05114 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
HMGN1P05114 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC17.31■□□□□ 0.36
HMGN1P05114 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
HMGN1P05114 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
HMGN1P05114 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
HMGN1P05114 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC17.31■□□□□ 0.36
HMGN1P05114 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
HMGN1P05114 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC17.31■□□□□ 0.36
HMGN1P05114 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
HMGN1P05114 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
HMGN1P05114 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
HMGN1P05114 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
HMGN1P05114 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
HMGN1P05114 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
HMGN1P05114 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
HMGN1P05114 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC17.31■□□□□ 0.36
HMGN1P05114 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
HMGN1P05114 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
HMGN1P05114 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC17.31■□□□□ 0.36
HMGN1P05114 MARS-234ENST00000630571 216 ntTSL 5 BASIC17.31■□□□□ 0.36
HMGN1P05114 MARS-235ENST00000630803 183 ntTSL 3 BASIC17.31■□□□□ 0.36
HMGN1P05114 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC17.31■□□□□ 0.36
HMGN1P05114 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC17.31■□□□□ 0.36
HMGN1P05114 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
HMGN1P05114 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
HMGN1P05114 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
HMGN1P05114 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
HMGN1P05114 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC17.31■□□□□ 0.36
HMGN1P05114 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
HMGN1P05114 COMP-202ENST00000425807 2292 ntTSL 2 BASIC17.31■□□□□ 0.36
HMGN1P05114 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
HMGN1P05114 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
HMGN1P05114 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
HMGN1P05114 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
HMGN1P05114 AL390961.4-201ENST00000623958 2535 ntBASIC17.3■□□□□ 0.36
HMGN1P05114 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC17.3■□□□□ 0.36
HMGN1P05114 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC17.3■□□□□ 0.36
HMGN1P05114 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
HMGN1P05114 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC17.3■□□□□ 0.36
HMGN1P05114 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC17.3■□□□□ 0.36
HMGN1P05114 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
HMGN1P05114 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
HMGN1P05114 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
HMGN1P05114 AC026271.2-201ENST00000428091 497 ntBASIC17.3■□□□□ 0.36
HMGN1P05114 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC17.3■□□□□ 0.36
HMGN1P05114 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
HMGN1P05114 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC17.3■□□□□ 0.36
HMGN1P05114 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
HMGN1P05114 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
HMGN1P05114 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
HMGN1P05114 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
HMGN1P05114 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
HMGN1P05114 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
HMGN1P05114 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC17.3■□□□□ 0.36
HMGN1P05114 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
HMGN1P05114 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
HMGN1P05114 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
HMGN1P05114 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
HMGN1P05114 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
HMGN1P05114 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
HMGN1P05114 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC17.3■□□□□ 0.36
HMGN1P05114 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
HMGN1P05114 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
HMGN1P05114 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
HMGN1P05114 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC17.3■□□□□ 0.36
HMGN1P05114 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
HMGN1P05114 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
HMGN1P05114 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
HMGN1P05114 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC17.29■□□□□ 0.36
HMGN1P05114 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
HMGN1P05114 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
HMGN1P05114 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
HMGN1P05114 OR2A1-AS1-201ENST00000462305 773 ntBASIC17.29■□□□□ 0.36
HMGN1P05114 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC17.29■□□□□ 0.36
HMGN1P05114 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
HMGN1P05114 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC17.29■□□□□ 0.36
HMGN1P05114 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
HMGN1P05114 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC17.29■□□□□ 0.36
HMGN1P05114 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC17.29■□□□□ 0.36
HMGN1P05114 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
HMGN1P05114 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
HMGN1P05114 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
HMGN1P05114 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
HMGN1P05114 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC17.29■□□□□ 0.36
HMGN1P05114 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
HMGN1P05114 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
HMGN1P05114 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
HMGN1P05114 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC17.29■□□□□ 0.36
HMGN1P05114 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
HMGN1P05114 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC17.28■□□□□ 0.36
HMGN1P05114 AC124283.5-201ENST00000624661 1809 ntBASIC17.28■□□□□ 0.36
HMGN1P05114 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC17.28■□□□□ 0.36
HMGN1P05114 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC17.28■□□□□ 0.36
HMGN1P05114 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
HMGN1P05114 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
HMGN1P05114 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
HMGN1P05114 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC17.28■□□□□ 0.36
HMGN1P05114 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms