Protein–RNA interactions for Protein: P04440

HLA-DPB1, HLA class II histocompatibility antigen, DP beta 1 chain, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPB1P04440 BICD1-207ENST00000551848 1962 ntBASIC17.19■□□□□ 0.34
HLA-DPB1P04440 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
HLA-DPB1P04440 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
HLA-DPB1P04440 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
HLA-DPB1P04440 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
HLA-DPB1P04440 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
HLA-DPB1P04440 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
HLA-DPB1P04440 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
HLA-DPB1P04440 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
HLA-DPB1P04440 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC17.18■□□□□ 0.34
HLA-DPB1P04440 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
HLA-DPB1P04440 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
HLA-DPB1P04440 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
HLA-DPB1P04440 BET1L-207ENST00000529614 560 ntTSL 5 BASIC17.18■□□□□ 0.34
HLA-DPB1P04440 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC17.18■□□□□ 0.34
HLA-DPB1P04440 BRWD1-AS2-201ENST00000603064 1028 ntBASIC17.18■□□□□ 0.34
HLA-DPB1P04440 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
HLA-DPB1P04440 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
HLA-DPB1P04440 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
HLA-DPB1P04440 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
HLA-DPB1P04440 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
HLA-DPB1P04440 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
HLA-DPB1P04440 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC17.18■□□□□ 0.34
HLA-DPB1P04440 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC17.18■□□□□ 0.34
HLA-DPB1P04440 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
HLA-DPB1P04440 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
HLA-DPB1P04440 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
HLA-DPB1P04440 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
HLA-DPB1P04440 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
HLA-DPB1P04440 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC17.18■□□□□ 0.34
HLA-DPB1P04440 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC17.18■□□□□ 0.34
HLA-DPB1P04440 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC17.18■□□□□ 0.34
HLA-DPB1P04440 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
HLA-DPB1P04440 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
HLA-DPB1P04440 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC17.17■□□□□ 0.34
HLA-DPB1P04440 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
HLA-DPB1P04440 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
HLA-DPB1P04440 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
HLA-DPB1P04440 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
HLA-DPB1P04440 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
HLA-DPB1P04440 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC17.17■□□□□ 0.34
HLA-DPB1P04440 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
HLA-DPB1P04440 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
HLA-DPB1P04440 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
HLA-DPB1P04440 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
HLA-DPB1P04440 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
HLA-DPB1P04440 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
HLA-DPB1P04440 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
HLA-DPB1P04440 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC17.17■□□□□ 0.34
HLA-DPB1P04440 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC17.17■□□□□ 0.34
HLA-DPB1P04440 AC091874.3-201ENST00000512672 1195 ntBASIC17.17■□□□□ 0.34
HLA-DPB1P04440 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
HLA-DPB1P04440 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC17.17■□□□□ 0.34
HLA-DPB1P04440 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC17.17■□□□□ 0.34
HLA-DPB1P04440 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC17.17■□□□□ 0.34
HLA-DPB1P04440 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC17.17■□□□□ 0.34
HLA-DPB1P04440 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
HLA-DPB1P04440 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC17.17■□□□□ 0.34
HLA-DPB1P04440 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
HLA-DPB1P04440 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
HLA-DPB1P04440 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
HLA-DPB1P04440 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC17.17■□□□□ 0.34
HLA-DPB1P04440 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
HLA-DPB1P04440 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC17.17■□□□□ 0.34
HLA-DPB1P04440 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
HLA-DPB1P04440 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC17.17■□□□□ 0.34
HLA-DPB1P04440 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC17.17■□□□□ 0.34
HLA-DPB1P04440 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
HLA-DPB1P04440 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
HLA-DPB1P04440 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
HLA-DPB1P04440 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
HLA-DPB1P04440 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
HLA-DPB1P04440 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
HLA-DPB1P04440 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
HLA-DPB1P04440 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC17.16■□□□□ 0.34
HLA-DPB1P04440 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
HLA-DPB1P04440 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
HLA-DPB1P04440 USP39-202ENST00000409025 1946 ntTSL 5 BASIC17.16■□□□□ 0.34
HLA-DPB1P04440 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC17.16■□□□□ 0.34
HLA-DPB1P04440 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
HLA-DPB1P04440 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC17.16■□□□□ 0.34
HLA-DPB1P04440 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
HLA-DPB1P04440 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
HLA-DPB1P04440 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC17.16■□□□□ 0.34
HLA-DPB1P04440 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC17.16■□□□□ 0.34
HLA-DPB1P04440 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC17.16■□□□□ 0.34
HLA-DPB1P04440 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
HLA-DPB1P04440 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
HLA-DPB1P04440 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC17.16■□□□□ 0.34
HLA-DPB1P04440 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
HLA-DPB1P04440 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC17.16■□□□□ 0.34
HLA-DPB1P04440 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
HLA-DPB1P04440 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
HLA-DPB1P04440 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC17.16■□□□□ 0.34
HLA-DPB1P04440 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
HLA-DPB1P04440 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
HLA-DPB1P04440 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC17.16■□□□□ 0.34
HLA-DPB1P04440 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
HLA-DPB1P04440 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
HLA-DPB1P04440 AL133373.2-201ENST00000623187 2828 ntBASIC17.16■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms