Protein–RNA interactions for Protein: P04436

T-cell receptor alpha chain V region HPB-MLT (Fragment), humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04436 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC17.48■□□□□ 0.39
P04436 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
P04436 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC17.48■□□□□ 0.39
P04436 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC17.48■□□□□ 0.39
P04436 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC17.48■□□□□ 0.39
P04436 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
P04436 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC17.48■□□□□ 0.39
P04436 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
P04436 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC17.48■□□□□ 0.39
P04436 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
P04436 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
P04436 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC17.48■□□□□ 0.39
P04436 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
P04436 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
P04436 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
P04436 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
P04436 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC17.47■□□□□ 0.39
P04436 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
P04436 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
P04436 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
P04436 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
P04436 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
P04436 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
P04436 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC17.47■□□□□ 0.39
P04436 P4HB-223ENST00000576390 439 ntTSL 4 BASIC17.47■□□□□ 0.39
P04436 GPX4-207ENST00000589115 812 ntTSL 2 BASIC17.47■□□□□ 0.39
P04436 AC092865.7-201ENST00000641832 219 ntBASIC17.47■□□□□ 0.39
P04436 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
P04436 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC17.47■□□□□ 0.39
P04436 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
P04436 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
P04436 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
P04436 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
P04436 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
P04436 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC17.47■□□□□ 0.39
P04436 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
P04436 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
P04436 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
P04436 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC17.47■□□□□ 0.39
P04436 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
P04436 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC17.47■□□□□ 0.39
P04436 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC17.47■□□□□ 0.39
P04436 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC17.46■□□□□ 0.39
P04436 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
P04436 AC125437.2-201ENST00000625180 2167 ntBASIC17.46■□□□□ 0.39
P04436 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
P04436 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
P04436 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC17.46■□□□□ 0.39
P04436 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC17.46■□□□□ 0.39
P04436 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC17.46■□□□□ 0.39
P04436 HMGA1P5-201ENST00000412453 271 ntBASIC17.46■□□□□ 0.39
P04436 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
P04436 TMPOP1-202ENST00000424642 1267 ntBASIC17.46■□□□□ 0.39
P04436 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
P04436 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC17.46■□□□□ 0.39
P04436 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
P04436 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
P04436 AC010653.2-201ENST00000623505 997 ntBASIC17.46■□□□□ 0.39
P04436 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC17.46■□□□□ 0.39
P04436 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
P04436 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
P04436 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
P04436 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
P04436 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
P04436 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC17.46■□□□□ 0.39
P04436 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
P04436 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
P04436 Z82202.1-201ENST00000623446 1880 ntBASIC17.46■□□□□ 0.38
P04436 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
P04436 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC17.45■□□□□ 0.38
P04436 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC17.45■□□□□ 0.38
P04436 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
P04436 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
P04436 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC17.45■□□□□ 0.38
P04436 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC17.45■□□□□ 0.38
P04436 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
P04436 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC17.45■□□□□ 0.38
P04436 TK2-213ENST00000563369 882 ntTSL 5 BASIC17.45■□□□□ 0.38
P04436 AL353719.1-201ENST00000566847 864 ntBASIC17.45■□□□□ 0.38
P04436 RN7SL850P-201ENST00000579959 291 ntBASIC17.45■□□□□ 0.38
P04436 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
P04436 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC17.45■□□□□ 0.38
P04436 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
P04436 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
P04436 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
P04436 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC17.45■□□□□ 0.38
P04436 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC17.45■□□□□ 0.38
P04436 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC17.45■□□□□ 0.38
P04436 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
P04436 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
P04436 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
P04436 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
P04436 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
P04436 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
P04436 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
P04436 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
P04436 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
P04436 BID-204ENST00000399767 2129 ntTSL 2 BASIC17.44■□□□□ 0.38
P04436 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
P04436 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC17.44■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 47.6 ms