Protein–RNA interactions for Protein: P04180

LCAT, Phosphatidylcholine-sterol acyltransferase, humanhuman

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCATP04180 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
LCATP04180 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
LCATP04180 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
LCATP04180 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
LCATP04180 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC16.72■□□□□ 0.27
LCATP04180 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC16.72■□□□□ 0.27
LCATP04180 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC16.72■□□□□ 0.27
LCATP04180 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC16.72■□□□□ 0.27
LCATP04180 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
LCATP04180 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
LCATP04180 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC16.72■□□□□ 0.27
LCATP04180 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
LCATP04180 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
LCATP04180 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
LCATP04180 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
LCATP04180 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
LCATP04180 ISG20-202ENST00000379224 540 ntTSL 3 BASIC16.72■□□□□ 0.27
LCATP04180 KRT16P5-201ENST00000455284 522 ntBASIC16.72■□□□□ 0.27
LCATP04180 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC16.72■□□□□ 0.27
LCATP04180 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
LCATP04180 AC124016.1-201ENST00000609552 612 ntBASIC16.72■□□□□ 0.27
LCATP04180 AC110285.5-201ENST00000611501 352 ntBASIC16.72■□□□□ 0.27
LCATP04180 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
LCATP04180 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
LCATP04180 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
LCATP04180 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
LCATP04180 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
LCATP04180 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
LCATP04180 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
LCATP04180 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC16.72■□□□□ 0.27
LCATP04180 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
LCATP04180 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
LCATP04180 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
LCATP04180 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC16.72■□□□□ 0.27
LCATP04180 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
LCATP04180 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
LCATP04180 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
LCATP04180 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
LCATP04180 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC16.71■□□□□ 0.27
LCATP04180 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC16.71■□□□□ 0.27
LCATP04180 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
LCATP04180 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
LCATP04180 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.27
LCATP04180 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
LCATP04180 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
LCATP04180 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
LCATP04180 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
LCATP04180 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
LCATP04180 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.27
LCATP04180 SERF2-207ENST00000409614 582 ntTSL 2 BASIC16.71■□□□□ 0.27
LCATP04180 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC16.71■□□□□ 0.27
LCATP04180 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC16.71■□□□□ 0.27
LCATP04180 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC16.71■□□□□ 0.27
LCATP04180 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
LCATP04180 C1QBPP2-201ENST00000528754 825 ntBASIC16.71■□□□□ 0.27
LCATP04180 IRX5-204ENST00000560154 879 ntTSL 5 BASIC16.71■□□□□ 0.27
LCATP04180 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
LCATP04180 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
LCATP04180 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.27
LCATP04180 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
LCATP04180 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC16.71■□□□□ 0.27
LCATP04180 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
LCATP04180 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
LCATP04180 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
LCATP04180 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC16.71■□□□□ 0.27
LCATP04180 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
LCATP04180 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC16.71■□□□□ 0.27
LCATP04180 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
LCATP04180 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.26
LCATP04180 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
LCATP04180 MCC-208ENST00000514701 2855 ntTSL 2 BASIC16.71■□□□□ 0.26
LCATP04180 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
LCATP04180 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
LCATP04180 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC16.7■□□□□ 0.26
LCATP04180 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
LCATP04180 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC16.7■□□□□ 0.26
LCATP04180 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
LCATP04180 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
LCATP04180 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
LCATP04180 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
LCATP04180 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
LCATP04180 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC16.7■□□□□ 0.26
LCATP04180 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
LCATP04180 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC16.7■□□□□ 0.26
LCATP04180 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
LCATP04180 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC16.7■□□□□ 0.26
LCATP04180 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC16.7■□□□□ 0.26
LCATP04180 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC16.7■□□□□ 0.26
LCATP04180 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC16.7■□□□□ 0.26
LCATP04180 HLA-A-209ENST00000638375 975 ntBASIC16.7■□□□□ 0.26
LCATP04180 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
LCATP04180 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC16.7■□□□□ 0.26
LCATP04180 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC16.7■□□□□ 0.26
LCATP04180 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
LCATP04180 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
LCATP04180 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC16.7■□□□□ 0.26
LCATP04180 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
LCATP04180 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
LCATP04180 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
LCATP04180 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms