Protein–RNA interactions for Protein: P04179

SOD2, Superoxide dismutase [Mn], mitochondrial, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOD2P04179 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SOD2P04179 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SOD2P04179 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC20.17■□□□□ 0.82
SOD2P04179 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
SOD2P04179 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SOD2P04179 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC20.16■□□□□ 0.82
SOD2P04179 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SOD2P04179 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC20.16■□□□□ 0.82
SOD2P04179 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC20.16■□□□□ 0.82
SOD2P04179 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC20.16■□□□□ 0.82
SOD2P04179 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
SOD2P04179 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SOD2P04179 HBZP1-201ENST00000354915 429 ntBASIC20.16■□□□□ 0.82
SOD2P04179 IPPK-202ENST00000375522 882 ntTSL 3 BASIC20.16■□□□□ 0.82
SOD2P04179 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC20.16■□□□□ 0.82
SOD2P04179 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC20.16■□□□□ 0.82
SOD2P04179 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC20.16■□□□□ 0.82
SOD2P04179 SPDYE13P-201ENST00000445314 798 ntBASIC20.16■□□□□ 0.82
SOD2P04179 RASA4DP-201ENST00000460726 1199 ntBASIC20.16■□□□□ 0.82
SOD2P04179 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
SOD2P04179 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC20.16■□□□□ 0.82
SOD2P04179 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
SOD2P04179 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC20.16■□□□□ 0.82
SOD2P04179 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
SOD2P04179 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
SOD2P04179 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
SOD2P04179 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC20.16■□□□□ 0.82
SOD2P04179 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC20.16■□□□□ 0.82
SOD2P04179 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC20.16■□□□□ 0.82
SOD2P04179 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
SOD2P04179 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SOD2P04179 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SOD2P04179 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SOD2P04179 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SOD2P04179 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
SOD2P04179 DUSP5P1-201ENST00000441325 1139 ntBASIC20.15■□□□□ 0.82
SOD2P04179 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC20.15■□□□□ 0.82
SOD2P04179 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC20.15■□□□□ 0.82
SOD2P04179 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC20.15■□□□□ 0.82
SOD2P04179 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
SOD2P04179 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC20.15■□□□□ 0.82
SOD2P04179 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC20.15■□□□□ 0.82
SOD2P04179 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
SOD2P04179 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC20.15■□□□□ 0.82
SOD2P04179 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC20.15■□□□□ 0.82
SOD2P04179 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SOD2P04179 AC036111.1-201ENST00000533973 1582 ntBASIC20.15■□□□□ 0.82
SOD2P04179 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC20.15■□□□□ 0.82
SOD2P04179 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC20.15■□□□□ 0.82
SOD2P04179 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SOD2P04179 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC20.15■□□□□ 0.82
SOD2P04179 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
SOD2P04179 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC20.15■□□□□ 0.82
SOD2P04179 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
SOD2P04179 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.82
SOD2P04179 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
SOD2P04179 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC20.14■□□□□ 0.81
SOD2P04179 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC20.14■□□□□ 0.81
SOD2P04179 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
SOD2P04179 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
SOD2P04179 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC20.14■□□□□ 0.81
SOD2P04179 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
SOD2P04179 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
SOD2P04179 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
SOD2P04179 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
SOD2P04179 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
SOD2P04179 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC20.14■□□□□ 0.81
SOD2P04179 CNP-204ENST00000472031 1019 ntTSL 2 BASIC20.14■□□□□ 0.81
SOD2P04179 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC20.14■□□□□ 0.81
SOD2P04179 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
SOD2P04179 AC112907.3-201ENST00000577781 2400 ntBASIC20.14■□□□□ 0.81
SOD2P04179 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
SOD2P04179 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
SOD2P04179 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
SOD2P04179 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
SOD2P04179 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
SOD2P04179 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC20.13■□□□□ 0.81
SOD2P04179 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
SOD2P04179 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
SOD2P04179 KRT8P3-201ENST00000519669 1449 ntBASIC20.13■□□□□ 0.81
SOD2P04179 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC20.13■□□□□ 0.81
SOD2P04179 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC20.13■□□□□ 0.81
SOD2P04179 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
SOD2P04179 MCCD1P1-208ENST00000445732 328 ntBASIC20.13■□□□□ 0.81
SOD2P04179 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC20.13■□□□□ 0.81
SOD2P04179 MIR3180-5-201ENST00000583743 153 ntBASIC20.13■□□□□ 0.81
SOD2P04179 AC024243.1-201ENST00000609234 778 ntBASIC20.13■□□□□ 0.81
SOD2P04179 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC20.13■□□□□ 0.81
SOD2P04179 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC20.13■□□□□ 0.81
SOD2P04179 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC20.13■□□□□ 0.81
SOD2P04179 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC20.13■□□□□ 0.81
SOD2P04179 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
SOD2P04179 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
SOD2P04179 AL157384.1-201ENST00000445995 2473 ntBASIC20.13■□□□□ 0.81
SOD2P04179 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC20.13■□□□□ 0.81
SOD2P04179 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC20.12■□□□□ 0.81
SOD2P04179 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC20.12■□□□□ 0.81
SOD2P04179 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
SOD2P04179 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
SOD2P04179 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms