Protein–RNA interactions for Protein: P03897

MT-ND3, NADH-ubiquinone oxidoreductase chain 3, humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND3P03897 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
MT-ND3P03897 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC19.46■□□□□ 0.71
MT-ND3P03897 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
MT-ND3P03897 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC19.46■□□□□ 0.71
MT-ND3P03897 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC19.46■□□□□ 0.71
MT-ND3P03897 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC19.46■□□□□ 0.71
MT-ND3P03897 AC104581.1-202ENST00000635932 2618 ntBASIC19.46■□□□□ 0.71
MT-ND3P03897 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
MT-ND3P03897 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC19.46■□□□□ 0.71
MT-ND3P03897 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC19.46■□□□□ 0.71
MT-ND3P03897 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC19.46■□□□□ 0.71
MT-ND3P03897 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC19.46■□□□□ 0.71
MT-ND3P03897 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
MT-ND3P03897 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC19.46■□□□□ 0.71
MT-ND3P03897 RPS2P52-201ENST00000469610 820 ntBASIC19.46■□□□□ 0.71
MT-ND3P03897 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC19.46■□□□□ 0.71
MT-ND3P03897 PNMA6B-201ENST00000538162 1200 ntBASIC19.46■□□□□ 0.71
MT-ND3P03897 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
MT-ND3P03897 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
MT-ND3P03897 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
MT-ND3P03897 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
MT-ND3P03897 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC19.46■□□□□ 0.71
MT-ND3P03897 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC19.46■□□□□ 0.71
MT-ND3P03897 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC19.46■□□□□ 0.71
MT-ND3P03897 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC19.46■□□□□ 0.71
MT-ND3P03897 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
MT-ND3P03897 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
MT-ND3P03897 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
MT-ND3P03897 EML3-217ENST00000531557 2509 ntTSL 5 BASIC19.46■□□□□ 0.71
MT-ND3P03897 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
MT-ND3P03897 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
MT-ND3P03897 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
MT-ND3P03897 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
MT-ND3P03897 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
MT-ND3P03897 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC19.45■□□□□ 0.7
MT-ND3P03897 AC092368.3-202ENST00000574180 1591 ntBASIC19.45■□□□□ 0.7
MT-ND3P03897 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
MT-ND3P03897 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
MT-ND3P03897 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
MT-ND3P03897 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
MT-ND3P03897 KRT17P3-201ENST00000420566 1262 ntBASIC19.45■□□□□ 0.7
MT-ND3P03897 AL158047.1-201ENST00000445918 881 ntBASIC19.45■□□□□ 0.7
MT-ND3P03897 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
MT-ND3P03897 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC19.45■□□□□ 0.7
MT-ND3P03897 AC073648.6-201ENST00000641589 218 ntBASIC19.45■□□□□ 0.7
MT-ND3P03897 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
MT-ND3P03897 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
MT-ND3P03897 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
MT-ND3P03897 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
MT-ND3P03897 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC19.45■□□□□ 0.7
MT-ND3P03897 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC19.45■□□□□ 0.7
MT-ND3P03897 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
MT-ND3P03897 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
MT-ND3P03897 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC19.45■□□□□ 0.7
MT-ND3P03897 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
MT-ND3P03897 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC19.45■□□□□ 0.7
MT-ND3P03897 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
MT-ND3P03897 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
MT-ND3P03897 CRK-204ENST00000574295 1391 ntTSL 5 BASIC19.44■□□□□ 0.7
MT-ND3P03897 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
MT-ND3P03897 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC19.44■□□□□ 0.7
MT-ND3P03897 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.7
MT-ND3P03897 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
MT-ND3P03897 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
MT-ND3P03897 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
MT-ND3P03897 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
MT-ND3P03897 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
MT-ND3P03897 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
MT-ND3P03897 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
MT-ND3P03897 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
MT-ND3P03897 MFF-205ENST00000354503 1085 ntTSL 2 BASIC19.44■□□□□ 0.7
MT-ND3P03897 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC19.44■□□□□ 0.7
MT-ND3P03897 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC19.44■□□□□ 0.7
MT-ND3P03897 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC19.44■□□□□ 0.7
MT-ND3P03897 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC19.44■□□□□ 0.7
MT-ND3P03897 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC19.44■□□□□ 0.7
MT-ND3P03897 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC19.44■□□□□ 0.7
MT-ND3P03897 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC19.44■□□□□ 0.7
MT-ND3P03897 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
MT-ND3P03897 BCL2-203ENST00000589955 5011 ntBASIC19.44■□□□□ 0.7
MT-ND3P03897 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
MT-ND3P03897 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
MT-ND3P03897 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC19.44■□□□□ 0.7
MT-ND3P03897 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
MT-ND3P03897 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
MT-ND3P03897 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
MT-ND3P03897 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
MT-ND3P03897 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
MT-ND3P03897 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC19.43■□□□□ 0.7
MT-ND3P03897 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC19.43■□□□□ 0.7
MT-ND3P03897 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
MT-ND3P03897 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
MT-ND3P03897 ZNF815P-204ENST00000434898 1737 ntBASIC19.43■□□□□ 0.7
MT-ND3P03897 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
MT-ND3P03897 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
MT-ND3P03897 AC005082.1-201ENST00000413042 2259 ntBASIC19.43■□□□□ 0.7
MT-ND3P03897 UNC93B4-201ENST00000505679 747 ntBASIC19.43■□□□□ 0.7
MT-ND3P03897 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
MT-ND3P03897 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC19.43■□□□□ 0.7
MT-ND3P03897 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC19.43■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms