Protein–RNA interactions for Protein: P03886

MT-ND1, NADH-ubiquinone oxidoreductase chain 1, humanhuman

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND1P03886 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC18.04■□□□□ 0.48
MT-ND1P03886 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC18.04■□□□□ 0.48
MT-ND1P03886 AC068880.1-201ENST00000507289 2297 ntBASIC18.03■□□□□ 0.48
MT-ND1P03886 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC18.03■□□□□ 0.48
MT-ND1P03886 KRT17P1-201ENST00000399211 1546 ntBASIC18.03■□□□□ 0.48
MT-ND1P03886 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC18.03■□□□□ 0.48
MT-ND1P03886 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
MT-ND1P03886 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
MT-ND1P03886 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
MT-ND1P03886 SDHAP1-207ENST00000440850 2000 ntBASIC18.03■□□□□ 0.48
MT-ND1P03886 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC18.03■□□□□ 0.48
MT-ND1P03886 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
MT-ND1P03886 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
MT-ND1P03886 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
MT-ND1P03886 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
MT-ND1P03886 AC079598.2-202ENST00000546624 1451 ntBASIC18.03■□□□□ 0.48
MT-ND1P03886 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
MT-ND1P03886 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
MT-ND1P03886 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
MT-ND1P03886 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC18.03■□□□□ 0.48
MT-ND1P03886 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
MT-ND1P03886 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC18.03■□□□□ 0.48
MT-ND1P03886 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC18.03■□□□□ 0.48
MT-ND1P03886 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC18.03■□□□□ 0.48
MT-ND1P03886 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC18.03■□□□□ 0.48
MT-ND1P03886 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
MT-ND1P03886 AC116351.2-201ENST00000606540 1585 ntBASIC18.03■□□□□ 0.48
MT-ND1P03886 AC093525.10-201ENST00000625130 1569 ntBASIC18.03■□□□□ 0.48
MT-ND1P03886 NOC2LP1-202ENST00000452600 2235 ntBASIC18.03■□□□□ 0.48
MT-ND1P03886 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC18.03■□□□□ 0.48
MT-ND1P03886 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
MT-ND1P03886 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC18.03■□□□□ 0.48
MT-ND1P03886 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
MT-ND1P03886 HTR7P1-202ENST00000624664 4411 ntBASIC18.03■□□□□ 0.48
MT-ND1P03886 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
MT-ND1P03886 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC18.02■□□□□ 0.48
MT-ND1P03886 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
MT-ND1P03886 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
MT-ND1P03886 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC18.02■□□□□ 0.48
MT-ND1P03886 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
MT-ND1P03886 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
MT-ND1P03886 NXN-202ENST00000537628 1340 ntTSL 3 BASIC18.02■□□□□ 0.48
MT-ND1P03886 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
MT-ND1P03886 EFTUD1P1-204ENST00000560401 1798 ntBASIC18.02■□□□□ 0.48
MT-ND1P03886 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
MT-ND1P03886 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
MT-ND1P03886 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
MT-ND1P03886 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
MT-ND1P03886 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
MT-ND1P03886 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
MT-ND1P03886 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
MT-ND1P03886 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC18.02■□□□□ 0.48
MT-ND1P03886 AC133552.2-202ENST00000575694 574 ntBASIC18.02■□□□□ 0.48
MT-ND1P03886 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC18.02■□□□□ 0.48
MT-ND1P03886 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
MT-ND1P03886 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC18.02■□□□□ 0.48
MT-ND1P03886 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
MT-ND1P03886 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC18.02■□□□□ 0.47
MT-ND1P03886 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC18.02■□□□□ 0.47
MT-ND1P03886 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC18.02■□□□□ 0.47
MT-ND1P03886 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
MT-ND1P03886 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
MT-ND1P03886 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.47
MT-ND1P03886 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC18.01■□□□□ 0.47
MT-ND1P03886 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
MT-ND1P03886 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC18.01■□□□□ 0.47
MT-ND1P03886 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
MT-ND1P03886 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
MT-ND1P03886 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
MT-ND1P03886 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
MT-ND1P03886 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
MT-ND1P03886 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
MT-ND1P03886 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC18.01■□□□□ 0.47
MT-ND1P03886 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC18.01■□□□□ 0.47
MT-ND1P03886 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
MT-ND1P03886 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
MT-ND1P03886 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
MT-ND1P03886 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
MT-ND1P03886 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
MT-ND1P03886 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC18.01■□□□□ 0.47
MT-ND1P03886 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC18.01■□□□□ 0.47
MT-ND1P03886 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC18.01■□□□□ 0.47
MT-ND1P03886 ISCU-212ENST00000547005 795 ntTSL 3 BASIC18.01■□□□□ 0.47
MT-ND1P03886 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
MT-ND1P03886 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
MT-ND1P03886 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
MT-ND1P03886 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
MT-ND1P03886 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
MT-ND1P03886 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
MT-ND1P03886 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC18.01■□□□□ 0.47
MT-ND1P03886 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
MT-ND1P03886 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC18.01■□□□□ 0.47
MT-ND1P03886 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
MT-ND1P03886 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
MT-ND1P03886 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC18.01■□□□□ 0.47
MT-ND1P03886 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
MT-ND1P03886 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC18■□□□□ 0.47
MT-ND1P03886 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC18■□□□□ 0.47
MT-ND1P03886 CD276-203ENST00000537340 2439 ntTSL 2 BASIC18■□□□□ 0.47
MT-ND1P03886 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 59.2 ms