Protein–RNA interactions for Protein: O95900

TRUB2, Mitochondrial mRNA pseudouridine synthase TRUB2, humanhuman

Known RBP Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRUB2O95900 AC130371.2-201ENST00000619443 611 ntBASIC20.05■□□□□ 0.8
TRUB2O95900 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC20.05■□□□□ 0.8
TRUB2O95900 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
TRUB2O95900 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
TRUB2O95900 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC20.05■□□□□ 0.8
TRUB2O95900 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC20.05■□□□□ 0.8
TRUB2O95900 AL049812.1-201ENST00000432563 2267 ntBASIC20.05■□□□□ 0.8
TRUB2O95900 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC20.05■□□□□ 0.8
TRUB2O95900 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
TRUB2O95900 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
TRUB2O95900 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
TRUB2O95900 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC20.04■□□□□ 0.8
TRUB2O95900 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
TRUB2O95900 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC20.04■□□□□ 0.8
TRUB2O95900 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC20.04■□□□□ 0.8
TRUB2O95900 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
TRUB2O95900 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC20.04■□□□□ 0.8
TRUB2O95900 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TRUB2O95900 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TRUB2O95900 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC20.04■□□□□ 0.8
TRUB2O95900 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TRUB2O95900 AC008040.2-201ENST00000461049 708 ntBASIC20.04■□□□□ 0.8
TRUB2O95900 AC091390.4-202ENST00000476426 537 ntBASIC20.04■□□□□ 0.8
TRUB2O95900 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC20.04■□□□□ 0.8
TRUB2O95900 AL355075.4-201ENST00000554988 638 ntBASIC20.04■□□□□ 0.8
TRUB2O95900 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
TRUB2O95900 AC011298.2-201ENST00000617989 482 ntBASIC20.04■□□□□ 0.8
TRUB2O95900 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
TRUB2O95900 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TRUB2O95900 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TRUB2O95900 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC20.04■□□□□ 0.8
TRUB2O95900 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
TRUB2O95900 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
TRUB2O95900 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TRUB2O95900 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TRUB2O95900 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
TRUB2O95900 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC20.04■□□□□ 0.8
TRUB2O95900 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TRUB2O95900 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
TRUB2O95900 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
TRUB2O95900 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
TRUB2O95900 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC20.03■□□□□ 0.8
TRUB2O95900 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
TRUB2O95900 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC20.03■□□□□ 0.8
TRUB2O95900 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC20.03■□□□□ 0.8
TRUB2O95900 DERL1-203ENST00000419562 918 ntTSL 2 BASIC20.03■□□□□ 0.8
TRUB2O95900 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC20.03■□□□□ 0.8
TRUB2O95900 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC20.03■□□□□ 0.8
TRUB2O95900 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC20.03■□□□□ 0.8
TRUB2O95900 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC20.03■□□□□ 0.8
TRUB2O95900 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC20.03■□□□□ 0.8
TRUB2O95900 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC20.03■□□□□ 0.8
TRUB2O95900 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
TRUB2O95900 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
TRUB2O95900 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
TRUB2O95900 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
TRUB2O95900 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
TRUB2O95900 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
TRUB2O95900 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
TRUB2O95900 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
TRUB2O95900 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
TRUB2O95900 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
TRUB2O95900 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
TRUB2O95900 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
TRUB2O95900 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC20.02■□□□□ 0.8
TRUB2O95900 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC20.02■□□□□ 0.8
TRUB2O95900 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC20.02■□□□□ 0.8
TRUB2O95900 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC20.02■□□□□ 0.8
TRUB2O95900 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC20.02■□□□□ 0.8
TRUB2O95900 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC20.02■□□□□ 0.8
TRUB2O95900 SNX21-213ENST00000614929 587 ntTSL 5 BASIC20.02■□□□□ 0.8
TRUB2O95900 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC20.02■□□□□ 0.8
TRUB2O95900 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
TRUB2O95900 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
TRUB2O95900 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC20.02■□□□□ 0.8
TRUB2O95900 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC20.02■□□□□ 0.8
TRUB2O95900 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
TRUB2O95900 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
TRUB2O95900 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
TRUB2O95900 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
TRUB2O95900 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
TRUB2O95900 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC20.01■□□□□ 0.79
TRUB2O95900 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
TRUB2O95900 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
TRUB2O95900 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC20.01■□□□□ 0.79
TRUB2O95900 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC20.01■□□□□ 0.79
TRUB2O95900 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
TRUB2O95900 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
TRUB2O95900 RBM17P1-201ENST00000453646 1190 ntBASIC20.01■□□□□ 0.79
TRUB2O95900 TSPY15P-201ENST00000457163 923 ntBASIC20.01■□□□□ 0.79
TRUB2O95900 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC20.01■□□□□ 0.79
TRUB2O95900 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC20.01■□□□□ 0.79
TRUB2O95900 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
TRUB2O95900 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC20.01■□□□□ 0.79
TRUB2O95900 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC20.01■□□□□ 0.79
TRUB2O95900 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC20.01■□□□□ 0.79
TRUB2O95900 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
TRUB2O95900 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
TRUB2O95900 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
TRUB2O95900 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms