Protein–RNA interactions for Protein: O95832

CLDN1, Claudin-1, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN1O95832 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
CLDN1O95832 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CLDN1O95832 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
CLDN1O95832 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
CLDN1O95832 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
CLDN1O95832 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC17.06■□□□□ 0.32
CLDN1O95832 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CLDN1O95832 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CLDN1O95832 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CLDN1O95832 FAAHP1-202ENST00000446499 1238 ntBASIC17.06■□□□□ 0.32
CLDN1O95832 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC17.06■□□□□ 0.32
CLDN1O95832 CNP-204ENST00000472031 1019 ntTSL 2 BASIC17.06■□□□□ 0.32
CLDN1O95832 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC17.06■□□□□ 0.32
CLDN1O95832 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC17.06■□□□□ 0.32
CLDN1O95832 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC17.06■□□□□ 0.32
CLDN1O95832 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC17.06■□□□□ 0.32
CLDN1O95832 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC17.06■□□□□ 0.32
CLDN1O95832 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC17.06■□□□□ 0.32
CLDN1O95832 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
CLDN1O95832 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC17.06■□□□□ 0.32
CLDN1O95832 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CLDN1O95832 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CLDN1O95832 AC121338.2-201ENST00000622535 1744 ntBASIC17.06■□□□□ 0.32
CLDN1O95832 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC17.06■□□□□ 0.32
CLDN1O95832 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CLDN1O95832 AL121603.2-201ENST00000557373 2117 ntBASIC17.06■□□□□ 0.32
CLDN1O95832 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC17.06■□□□□ 0.32
CLDN1O95832 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CLDN1O95832 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CLDN1O95832 ERF-202ENST00000440177 2032 ntTSL 2 BASIC17.06■□□□□ 0.32
CLDN1O95832 AC116351.2-201ENST00000606540 1585 ntBASIC17.06■□□□□ 0.32
CLDN1O95832 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC17.06■□□□□ 0.32
CLDN1O95832 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CLDN1O95832 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC17.05■□□□□ 0.32
CLDN1O95832 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CLDN1O95832 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CLDN1O95832 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CLDN1O95832 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC17.05■□□□□ 0.32
CLDN1O95832 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC17.05■□□□□ 0.32
CLDN1O95832 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CLDN1O95832 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC17.05■□□□□ 0.32
CLDN1O95832 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC17.05■□□□□ 0.32
CLDN1O95832 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC17.05■□□□□ 0.32
CLDN1O95832 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CLDN1O95832 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC17.05■□□□□ 0.32
CLDN1O95832 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC17.05■□□□□ 0.32
CLDN1O95832 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC17.05■□□□□ 0.32
CLDN1O95832 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC17.05■□□□□ 0.32
CLDN1O95832 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC17.05■□□□□ 0.32
CLDN1O95832 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CLDN1O95832 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CLDN1O95832 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC17.05■□□□□ 0.32
CLDN1O95832 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CLDN1O95832 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC17.04■□□□□ 0.32
CLDN1O95832 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CLDN1O95832 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
CLDN1O95832 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CLDN1O95832 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CLDN1O95832 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC17.04■□□□□ 0.32
CLDN1O95832 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC17.04■□□□□ 0.32
CLDN1O95832 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CLDN1O95832 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC17.04■□□□□ 0.32
CLDN1O95832 GOLGA6L3-201ENST00000507199 1679 ntBASIC17.04■□□□□ 0.32
CLDN1O95832 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CLDN1O95832 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC17.04■□□□□ 0.32
CLDN1O95832 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CLDN1O95832 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC17.04■□□□□ 0.32
CLDN1O95832 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CLDN1O95832 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CLDN1O95832 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CLDN1O95832 Telomerase-vert.1-201ENST00000363312 438 ntBASIC17.04■□□□□ 0.32
CLDN1O95832 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC17.04■□□□□ 0.32
CLDN1O95832 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC17.04■□□□□ 0.32
CLDN1O95832 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CLDN1O95832 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CLDN1O95832 AC009078.2-202ENST00000463353 338 ntBASIC17.04■□□□□ 0.32
CLDN1O95832 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC17.04■□□□□ 0.32
CLDN1O95832 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC17.04■□□□□ 0.32
CLDN1O95832 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC17.04■□□□□ 0.32
CLDN1O95832 AC092329.2-201ENST00000598402 547 ntBASIC17.04■□□□□ 0.32
CLDN1O95832 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC17.04■□□□□ 0.32
CLDN1O95832 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
CLDN1O95832 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC17.04■□□□□ 0.32
CLDN1O95832 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC17.04■□□□□ 0.32
CLDN1O95832 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CLDN1O95832 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC17.04■□□□□ 0.32
CLDN1O95832 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CLDN1O95832 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
CLDN1O95832 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
CLDN1O95832 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CLDN1O95832 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC17.03■□□□□ 0.32
CLDN1O95832 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
CLDN1O95832 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CLDN1O95832 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
CLDN1O95832 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
CLDN1O95832 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
CLDN1O95832 H19-201ENST00000411754 1788 ntTSL 5 BASIC17.03■□□□□ 0.32
CLDN1O95832 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
CLDN1O95832 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC17.03■□□□□ 0.32
CLDN1O95832 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC17.03■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms