Protein–RNA interactions for Protein: O94953

KDM4B, Lysine-specific demethylase 4B, humanhuman

Predictions only

Length 1,096 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDM4BO94953 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
KDM4BO94953 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC16.78■□□□□ 0.28
KDM4BO94953 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC16.78■□□□□ 0.28
KDM4BO94953 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
KDM4BO94953 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
KDM4BO94953 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
KDM4BO94953 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
KDM4BO94953 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
KDM4BO94953 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
KDM4BO94953 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.28
KDM4BO94953 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
KDM4BO94953 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
KDM4BO94953 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC16.77■□□□□ 0.28
KDM4BO94953 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC16.77■□□□□ 0.28
KDM4BO94953 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
KDM4BO94953 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC16.77■□□□□ 0.28
KDM4BO94953 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
KDM4BO94953 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC16.77■□□□□ 0.28
KDM4BO94953 GPX1P1-201ENST00000388829 606 ntBASIC16.77■□□□□ 0.28
KDM4BO94953 VPS53-216ENST00000574029 585 ntTSL 4 BASIC16.77■□□□□ 0.28
KDM4BO94953 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
KDM4BO94953 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
KDM4BO94953 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC16.77■□□□□ 0.28
KDM4BO94953 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
KDM4BO94953 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
KDM4BO94953 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
KDM4BO94953 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC16.77■□□□□ 0.27
KDM4BO94953 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
KDM4BO94953 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.27
KDM4BO94953 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC16.77■□□□□ 0.27
KDM4BO94953 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
KDM4BO94953 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC16.77■□□□□ 0.27
KDM4BO94953 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
KDM4BO94953 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
KDM4BO94953 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC16.76■□□□□ 0.27
KDM4BO94953 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
KDM4BO94953 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
KDM4BO94953 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
KDM4BO94953 MOK-233ENST00000524214 1539 ntTSL 2 BASIC16.76■□□□□ 0.27
KDM4BO94953 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC16.76■□□□□ 0.27
KDM4BO94953 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC16.76■□□□□ 0.27
KDM4BO94953 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
KDM4BO94953 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
KDM4BO94953 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
KDM4BO94953 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
KDM4BO94953 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
KDM4BO94953 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
KDM4BO94953 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
KDM4BO94953 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
KDM4BO94953 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC16.76■□□□□ 0.27
KDM4BO94953 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC16.76■□□□□ 0.27
KDM4BO94953 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
KDM4BO94953 MIR663A-201ENST00000385250 93 ntBASIC16.76■□□□□ 0.27
KDM4BO94953 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC16.76■□□□□ 0.27
KDM4BO94953 SERP1-205ENST00000487153 657 ntTSL 4 BASIC16.76■□□□□ 0.27
KDM4BO94953 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC16.76■□□□□ 0.27
KDM4BO94953 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC16.76■□□□□ 0.27
KDM4BO94953 PHB2-213ENST00000546111 858 ntTSL 2 BASIC16.76■□□□□ 0.27
KDM4BO94953 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
KDM4BO94953 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
KDM4BO94953 RAP2CP1-201ENST00000605103 478 ntBASIC16.76■□□□□ 0.27
KDM4BO94953 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC16.76■□□□□ 0.27
KDM4BO94953 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
KDM4BO94953 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
KDM4BO94953 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
KDM4BO94953 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
KDM4BO94953 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC16.76■□□□□ 0.27
KDM4BO94953 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
KDM4BO94953 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
KDM4BO94953 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
KDM4BO94953 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC16.76■□□□□ 0.27
KDM4BO94953 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
KDM4BO94953 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
KDM4BO94953 AC006333.2-201ENST00000607957 2099 ntBASIC16.76■□□□□ 0.27
KDM4BO94953 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
KDM4BO94953 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
KDM4BO94953 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
KDM4BO94953 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
KDM4BO94953 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
KDM4BO94953 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC16.75■□□□□ 0.27
KDM4BO94953 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
KDM4BO94953 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC16.75■□□□□ 0.27
KDM4BO94953 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
KDM4BO94953 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
KDM4BO94953 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
KDM4BO94953 AC020916.1-201ENST00000587762 1774 ntBASIC16.75■□□□□ 0.27
KDM4BO94953 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
KDM4BO94953 BX276092.2-201ENST00000417668 665 ntBASIC16.75■□□□□ 0.27
KDM4BO94953 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
KDM4BO94953 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
KDM4BO94953 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
KDM4BO94953 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
KDM4BO94953 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
KDM4BO94953 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
KDM4BO94953 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
KDM4BO94953 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
KDM4BO94953 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
KDM4BO94953 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC16.75■□□□□ 0.27
KDM4BO94953 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
KDM4BO94953 AC018470.1-201ENST00000624790 3129 ntBASIC16.74■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms