Protein–RNA interactions for Protein: O94822

LTN1, E3 ubiquitin-protein ligase listerin, humanhuman

Predictions only

Length 1,766 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1O94822 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC25.38■■□□□ 1.65
LTN1O94822 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC25.38■■□□□ 1.65
LTN1O94822 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
LTN1O94822 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC25.38■■□□□ 1.65
LTN1O94822 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC25.38■■□□□ 1.65
LTN1O94822 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC25.38■■□□□ 1.65
LTN1O94822 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
LTN1O94822 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC25.38■■□□□ 1.65
LTN1O94822 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC25.38■■□□□ 1.65
LTN1O94822 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
LTN1O94822 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC25.38■■□□□ 1.65
LTN1O94822 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC25.38■■□□□ 1.65
LTN1O94822 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
LTN1O94822 IRF5-214ENST00000613821 595 ntTSL 5 BASIC25.38■■□□□ 1.65
LTN1O94822 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC25.38■■□□□ 1.65
LTN1O94822 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
LTN1O94822 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
LTN1O94822 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
LTN1O94822 MCCD1P1-208ENST00000445732 328 ntBASIC25.37■■□□□ 1.65
LTN1O94822 AC024243.1-201ENST00000609234 778 ntBASIC25.37■■□□□ 1.65
LTN1O94822 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC25.37■■□□□ 1.65
LTN1O94822 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
LTN1O94822 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC25.37■■□□□ 1.65
LTN1O94822 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC25.37■■□□□ 1.65
LTN1O94822 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
LTN1O94822 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
LTN1O94822 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
LTN1O94822 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
LTN1O94822 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
LTN1O94822 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
LTN1O94822 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC25.36■■□□□ 1.65
LTN1O94822 TPSP2-201ENST00000561760 610 ntBASIC25.36■■□□□ 1.65
LTN1O94822 PRELID1P1-202ENST00000567272 903 ntBASIC25.36■■□□□ 1.65
LTN1O94822 AC079602.3-201ENST00000623931 403 ntBASIC25.36■■□□□ 1.65
LTN1O94822 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC25.36■■□□□ 1.65
LTN1O94822 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC25.36■■□□□ 1.65
LTN1O94822 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC25.36■■□□□ 1.65
LTN1O94822 TEX21P-204ENST00000641479 1693 ntBASIC25.36■■□□□ 1.65
LTN1O94822 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
LTN1O94822 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC25.36■■□□□ 1.65
LTN1O94822 AL023284.2-201ENST00000405850 579 ntBASIC25.36■■□□□ 1.65
LTN1O94822 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
LTN1O94822 AC111152.3-201ENST00000569699 673 ntBASIC25.36■■□□□ 1.65
LTN1O94822 TEN1-204ENST00000588202 862 ntTSL 3 BASIC25.36■■□□□ 1.65
LTN1O94822 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC25.36■■□□□ 1.65
LTN1O94822 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
LTN1O94822 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
LTN1O94822 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
LTN1O94822 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
LTN1O94822 Z82202.1-201ENST00000623446 1880 ntBASIC25.35■■□□□ 1.65
LTN1O94822 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC25.35■■□□□ 1.65
LTN1O94822 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC25.35■■□□□ 1.65
LTN1O94822 PPIH-202ENST00000372549 327 ntTSL 3 BASIC25.35■■□□□ 1.65
LTN1O94822 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
LTN1O94822 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC25.35■■□□□ 1.65
LTN1O94822 AC246785.2-201ENST00000432512 513 ntBASIC25.35■■□□□ 1.65
LTN1O94822 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC25.35■■□□□ 1.65
LTN1O94822 AC092119.3-201ENST00000612618 583 ntBASIC25.35■■□□□ 1.65
LTN1O94822 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC25.35■■□□□ 1.65
LTN1O94822 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC25.35■■□□□ 1.65
LTN1O94822 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
LTN1O94822 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC25.35■■□□□ 1.65
LTN1O94822 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
LTN1O94822 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC25.35■■□□□ 1.65
LTN1O94822 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
LTN1O94822 AL157384.1-201ENST00000445995 2473 ntBASIC25.34■■□□□ 1.65
LTN1O94822 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
LTN1O94822 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
LTN1O94822 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
LTN1O94822 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC25.34■■□□□ 1.65
LTN1O94822 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
LTN1O94822 SDHD-206ENST00000528182 754 ntTSL 3 BASIC25.34■■□□□ 1.65
LTN1O94822 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC25.34■■□□□ 1.65
LTN1O94822 SPEG-225ENST00000617028 815 ntTSL 5 BASIC25.34■■□□□ 1.65
LTN1O94822 VPS72-207ENST00000640458 689 ntTSL 5 BASIC25.34■■□□□ 1.65
LTN1O94822 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
LTN1O94822 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
LTN1O94822 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
LTN1O94822 TP73-202ENST00000354437 2140 ntTSL 5 BASIC25.34■■□□□ 1.65
LTN1O94822 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
LTN1O94822 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
LTN1O94822 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC25.33■■□□□ 1.65
LTN1O94822 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
LTN1O94822 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC25.33■■□□□ 1.65
LTN1O94822 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
LTN1O94822 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC25.33■■□□□ 1.65
LTN1O94822 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC25.33■■□□□ 1.65
LTN1O94822 LINC01006-201ENST00000333319 2292 ntBASIC25.33■■□□□ 1.65
LTN1O94822 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
LTN1O94822 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC25.33■■□□□ 1.65
LTN1O94822 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC25.33■■□□□ 1.65
LTN1O94822 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC25.33■■□□□ 1.65
LTN1O94822 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC25.33■■□□□ 1.65
LTN1O94822 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
LTN1O94822 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
LTN1O94822 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
LTN1O94822 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC25.33■■□□□ 1.65
LTN1O94822 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC25.33■■□□□ 1.65
LTN1O94822 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC25.33■■□□□ 1.65
LTN1O94822 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC25.33■■□□□ 1.65
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms